RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 PTPDC1A2A3K4 754 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 CUTAO60888 179 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 IDH1O75874 414 aaKnown RBP6.89□□□□□ -1.31
ATXN3-223ENST00000553686 AKR1B1P15121 316 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 USP10Q14694 798 aaKnown RBP6.89□□□□□ -1.31
ATXN3-223ENST00000553686 PWP2Q15269 919 aaKnown RBP6.89□□□□□ -1.31
ATXN3-223ENST00000553686 STILQ15468 1287 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 TCTN1Q2MV58 587 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 CATSPEREQ5SY80 951 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 CC2D1AQ6P1N0 951 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-223ENST00000553686 RALYLQ86SE5 291 aaKnown RBP6.89□□□□□ -1.31
ATXN3-223ENST00000553686 WDR63Q8IWG1 891 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 REXO1L1PQ8IX06 675 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 C7orf31Q8N865 590 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 CHST14Q8NCH0 376 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 P2RX5Q93086 422 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 CDCA3Q99618 268 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-223ENST00000553686 CRNKL1Q9BZJ0 848 aaKnown RBP6.89□□□□□ -1.31
ATXN3-223ENST00000553686 TLE6Q9H808 572 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 A1CFQ9NQ94 594 aaKnown RBP6.89□□□□□ -1.31
ATXN3-223ENST00000553686 HOMER2Q9NSB8 354 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 NCDNQ9UBB6 729 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 ADD3Q9UEY8 706 aaKnown RBP6.89□□□□□ -1.31
ATXN3-223ENST00000553686 FEM1BQ9UK73 627 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 ANGPTL2Q9UKU9 493 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 BARX2Q9UMQ3 279 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-223ENST00000553686 MRPL42Q9Y6G3 142 aaKnown RBP6.89□□□□□ -1.31
ATXN3-223ENST00000553686 R4GN57 208 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 PTPRCP08575 1304 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 MAP1BP46821 2468 aaKnown RBP6.89□□□□□ -1.31
ATXN3-223ENST00000553686 SETXQ7Z333 2677 aaKnown RBP6.89□□□□□ -1.31
ATXN3-223ENST00000553686 DNAH14Q0VDD8 3507 aa6.89□□□□□ -1.31
ATXN3-223ENST00000553686 RSPH10B2B2RC85 870 aa6.88□□□□□ -1.31
ATXN3-223ENST00000553686 PI15O43692 258 aa6.88□□□□□ -1.31
ATXN3-223ENST00000553686 KINO60870 393 aaKnown RBP6.88□□□□□ -1.31
ATXN3-223ENST00000553686 RSPH10BP0C881 870 aa6.88□□□□□ -1.31
ATXN3-223ENST00000553686 ZNF888P0CJ79 500 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-223ENST00000553686 ADCY8P40145 1251 aa6.88□□□□□ -1.31
ATXN3-223ENST00000553686 CD83Q01151 205 aa6.88□□□□□ -1.31
ATXN3-223ENST00000553686 EFEMP1Q12805 493 aa6.88□□□□□ -1.31
ATXN3-223ENST00000553686 TOP3AQ13472 1001 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-223ENST00000553686 PPP2R5BQ15173 497 aa6.88□□□□□ -1.31
ATXN3-223ENST00000553686 SPATS1Q496A3 300 aa6.88□□□□□ -1.31
ATXN3-223ENST00000553686 TMEM63BQ5T3F8 832 aa6.88□□□□□ -1.31
ATXN3-223ENST00000553686 ZNF618Q5T7W0 954 aa6.88□□□□□ -1.31
ATXN3-223ENST00000553686 RBM23Q86U06 439 aaKnown RBP6.88□□□□□ -1.31
ATXN3-223ENST00000553686 AMOTL1Q8IY63 956 aa6.88□□□□□ -1.31
ATXN3-223ENST00000553686 MORC4Q8TE76 937 aa6.88□□□□□ -1.31
ATXN3-223ENST00000553686 LOXL4Q96JB6 756 aa6.88□□□□□ -1.31
ATXN3-223ENST00000553686 MPHOSPH6Q99547 160 aaKnown RBP6.88□□□□□ -1.31
ATXN3-223ENST00000553686 SSBP3Q9BWW4 388 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-223ENST00000553686 INTS7Q9NVH2 962 aaKnown RBP6.88□□□□□ -1.31
ATXN3-223ENST00000553686 DMDP11532 3685 aa6.88□□□□□ -1.31
ATXN3-223ENST00000553686 UNC79Q9P2D8 2635 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 DMXL1Q9Y485 3027 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 F5H6K3 240 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 DVL2O14641 736 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 CSPG5O95196 566 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 HOXB8P17481 243 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-223ENST00000553686 CASTP20810 708 aaKnown RBP6.87□□□□□ -1.31
ATXN3-223ENST00000553686 KIF11P52732 1056 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 KLRC3Q07444 240 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 G3BP1Q13283 466 aaKnown RBP eCLIP6.87□□□□□ -1.31
ATXN3-223ENST00000553686 CAMK1Q14012 370 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 PLEKHG4Q58EX7 1191 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 SCFD2Q8WU76 684 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 APBB2Q92870 758 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 NECTIN4Q96NY8 510 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 CTAGE1Q96RT6 745 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 KATNAL1Q9BW62 490 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 ZDHHC5Q9C0B5 715 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 OR10A5Q9H207 317 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 GPR108Q9NPR9 543 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 SMC4Q9NTJ3 1288 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 RNF146Q9NTX7 359 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 B4GALT6Q9UBX8 382 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 FBXO10Q9UK96 956 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 CDC42EP3Q9UKI2 254 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 MYH2Q9UKX2 1941 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 PLXNA3P51805 1871 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 VPS13AQ96RL7 3174 aa6.87□□□□□ -1.31
ATXN3-223ENST00000553686 B4DLN1 442 aa6.86□□□□□ -1.31
ATXN3-223ENST00000553686 CBX4O00257 560 aa6.86□□□□□ -1.31
ATXN3-223ENST00000553686 GLP2RO95838 553 aa6.86□□□□□ -1.31
ATXN3-223ENST00000553686 PROS1P07225 676 aa6.86□□□□□ -1.31
ATXN3-223ENST00000553686 TXNP10599 105 aaKnown RBP6.86□□□□□ -1.31
ATXN3-223ENST00000553686 NEK4P51957 841 aa6.86□□□□□ -1.31
ATXN3-223ENST00000553686 MRPL12P52815 198 aaKnown RBP6.86□□□□□ -1.31
ATXN3-223ENST00000553686 BTG3Q14201 252 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-223ENST00000553686 ZNF174Q15697 407 aa6.86□□□□□ -1.31
ATXN3-223ENST00000553686 TRIM71Q2Q1W2 868 aaKnown RBP6.86□□□□□ -1.31
ATXN3-223ENST00000553686 SLFN13Q68D06 897 aa6.86□□□□□ -1.31
ATXN3-223ENST00000553686 CES5AQ6NT32 575 aa6.86□□□□□ -1.31
ATXN3-223ENST00000553686 ADGRD2Q7Z7M1 963 aa6.86□□□□□ -1.31
ATXN3-223ENST00000553686 JAZF1Q86VZ6 243 aa6.86□□□□□ -1.31
ATXN3-223ENST00000553686 RPAP2Q8IXW5 612 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-223ENST00000553686 SUMF1Q8NBK3 374 aa6.86□□□□□ -1.31
ATXN3-223ENST00000553686 SPPL3Q8TCT6 385 aa6.86□□□□□ -1.31
ATXN3-223ENST00000553686 CALML6Q8TD86 181 aa6.86□□□□□ -1.31
ATXN3-223ENST00000553686 ATP8B4Q8TF62 1192 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms