RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 GCNAQ96QF7 691 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 ERGIC2Q96RQ1 377 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 HNRNPABQ99729 332 aaKnown RBP14.69□□□□□ -0.06
TUBB3-202ENST00000553656 WDR6Q9NNW5 1121 aaKnown RBP14.69□□□□□ -0.06
TUBB3-202ENST00000553656 DMAP1Q9NPF5 467 aaPredicted RBP14.69□□□□□ -0.06
TUBB3-202ENST00000553656 RTN4Q9NQC3 1192 aaKnown RBP14.69□□□□□ -0.06
TUBB3-202ENST00000553656 EHD2Q9NZN4 543 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 CEP72Q9P209 647 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 CDH22Q9UJ99 828 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 FHOD1Q9Y613 1164 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 A0A1B0GTH6 734 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 F8VP50 259 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 ZNF197O14709 1029 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 FGF19O95750 216 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 RHOP08100 348 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 CSH1P0DML2 217 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 CSH2P0DML3 217 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 IL9P15248 144 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 FSHRP23945 695 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 GPR15P49685 360 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 STILQ15468 1287 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 SDHAF4Q5VUM1 108 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 ARHGAP17Q68EM7 881 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 DNAJB7Q7Z6W7 309 aaPredicted RBP14.68□□□□□ -0.06
TUBB3-202ENST00000553656 GPR152Q8TDT2 470 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 SHC3Q92529 594 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 C8orf48Q96LL4 319 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 PHF7Q9BWX1 381 aaPredicted RBP14.68□□□□□ -0.06
TUBB3-202ENST00000553656 POMKQ9H5K3 350 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 HCFC1R1Q9NWW0 138 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 DNMT3BQ9UBC3 853 aaKnown RBP14.68□□□□□ -0.06
TUBB3-202ENST00000553656 HESX1Q9UBX0 185 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 SIK3Q9Y2K2 1263 aa14.68□□□□□ -0.06
TUBB3-202ENST00000553656 CBFA2T2O43439 604 aa14.67□□□□□ -0.06
TUBB3-202ENST00000553656 MED7O43513 233 aa14.67□□□□□ -0.06
TUBB3-202ENST00000553656 MYL4P12829 197 aa14.67□□□□□ -0.06
TUBB3-202ENST00000553656 NPR3P17342 541 aa14.67□□□□□ -0.06
TUBB3-202ENST00000553656 KLK7P49862 253 aa14.67□□□□□ -0.06
TUBB3-202ENST00000553656 POLR2FP61218 127 aaKnown RBP14.67□□□□□ -0.06
TUBB3-202ENST00000553656 NTHL1P78549 312 aa14.67□□□□□ -0.06
TUBB3-202ENST00000553656 DRAP1Q14919 205 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-202ENST00000553656 GOLGA7BQ2TAP0 167 aa14.67□□□□□ -0.06
TUBB3-202ENST00000553656 TJAP1Q5JTD0 557 aa14.67□□□□□ -0.06
TUBB3-202ENST00000553656 PPP1R26Q5T8A7 1209 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-202ENST00000553656 GET4Q7L5D6 327 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-202ENST00000553656 CACNA2D4Q7Z3S7 1137 aa14.67□□□□□ -0.06
TUBB3-202ENST00000553656 ACSF2Q96CM8 615 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-202ENST00000553656 SPATA17Q96L03 361 aa14.67□□□□□ -0.06
TUBB3-202ENST00000553656 SPAG5Q96R06 1193 aa14.67□□□□□ -0.06
TUBB3-202ENST00000553656 STK33Q9BYT3 514 aa14.67□□□□□ -0.06
TUBB3-202ENST00000553656 UXTQ9UBK9 157 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-202ENST00000553656 MAGED2Q9UNF1 606 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-202ENST00000553656 CNTN6Q9UQ52 1028 aa14.67□□□□□ -0.06
TUBB3-202ENST00000553656 MRPS23Q9Y3D9 190 aaKnown RBP14.67□□□□□ -0.06
TUBB3-202ENST00000553656 NR2E1Q9Y466 385 aa14.67□□□□□ -0.06
TUBB3-202ENST00000553656 A0A1W2PQC6 194 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 SLC38A8A6NNN8 435 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 TEX33O43247 280 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 THAP12O43422 761 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 BRD2P25440 801 aaKnown RBP14.66□□□□□ -0.06
TUBB3-202ENST00000553656 GNA15P30679 374 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 ZNF132P52740 706 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 MAP3K7CLP57077 242 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 BPIFB4P59827 614 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 PLCB2Q00722 1185 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 PTK2Q05397 1052 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 DENND5BQ6ZUT9 1274 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 PAQR9Q6ZVX9 377 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 OTOP3Q7RTS5 596 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 HS6ST3Q8IZP7 471 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 TDRD5Q8NAT2 981 aaKnown RBP14.66□□□□□ -0.06
TUBB3-202ENST00000553656 FEZF2Q8TBJ5 459 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 RPGRIP1Q96KN7 1286 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 NAP1L5Q96NT1 182 aaPredicted RBP14.66□□□□□ -0.06
TUBB3-202ENST00000553656 GANQ9H2C0 597 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 NLRC4Q9NPP4 1024 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 AVENQ9NQS1 362 aaPredicted RBP14.66□□□□□ -0.06
TUBB3-202ENST00000553656 IFNKQ9P0W0 207 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 PRKAG3Q9UGI9 489 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 AJAP1Q9UKB5 411 aaPredicted RBP14.66□□□□□ -0.06
TUBB3-202ENST00000553656 TSPAN16Q9UKR8 245 aa14.66□□□□□ -0.06
TUBB3-202ENST00000553656 C2orf16Q68DN1 1984 aa14.65□□□□□ -0.06
TUBB3-202ENST00000553656 F8VZ95 297 aa14.65□□□□□ -0.06
TUBB3-202ENST00000553656 RNF225M0QZC1 329 aaPredicted RBP14.65□□□□□ -0.06
TUBB3-202ENST00000553656 O00370 1275 aa14.65□□□□□ -0.06
TUBB3-202ENST00000553656 CYP26A1O43174 497 aa14.65□□□□□ -0.06
TUBB3-202ENST00000553656 NOL4O94818 638 aa14.65□□□□□ -0.06
TUBB3-202ENST00000553656 RTN3O95197 1032 aaPredicted RBP14.65□□□□□ -0.06
TUBB3-202ENST00000553656 BMP1P13497 986 aa14.65□□□□□ -0.06
TUBB3-202ENST00000553656 SP100P23497 879 aaPredicted RBP14.65□□□□□ -0.06
TUBB3-202ENST00000553656 GABRR2P28476 465 aa14.65□□□□□ -0.06
TUBB3-202ENST00000553656 CDC25CP30307 473 aa14.65□□□□□ -0.06
TUBB3-202ENST00000553656 GBP2P32456 591 aaPredicted RBP14.65□□□□□ -0.06
TUBB3-202ENST00000553656 CACNA2D1P54289 1103 aa14.65□□□□□ -0.06
TUBB3-202ENST00000553656 BCAT1P54687 386 aa14.65□□□□□ -0.06
TUBB3-202ENST00000553656 EPHA5P54756 1037 aa14.65□□□□□ -0.06
TUBB3-202ENST00000553656 IFRD2Q12894 506 aaPredicted RBP14.65□□□□□ -0.06
TUBB3-202ENST00000553656 NR1I3Q14994 352 aa14.65□□□□□ -0.06
TUBB3-202ENST00000553656 ADHFE1Q8IWW8 467 aa14.65□□□□□ -0.06
TUBB3-202ENST00000553656 NUP93Q8N1F7 819 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms