RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 VRTNQ9H8Y1 702 aa12.39□□□□□ -0.43
CCNK-202ENST00000553636 TRPC7Q9HCX4 862 aa12.39□□□□□ -0.43
CCNK-202ENST00000553636 TRPV5Q9NQA5 729 aa12.39□□□□□ -0.43
CCNK-202ENST00000553636 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCNK-202ENST00000553636 SPATA6Q9NWH7 488 aaPredicted RBP12.39□□□□□ -0.43
CCNK-202ENST00000553636 OBP2AQ9NY56 170 aa12.39□□□□□ -0.43
CCNK-202ENST00000553636 MRPS17Q9Y2R5 130 aaKnown RBP12.39□□□□□ -0.43
CCNK-202ENST00000553636 HELZP42694 1942 aaKnown RBP12.39□□□□□ -0.43
CCNK-202ENST00000553636 ANAPC1Q9H1A4 1944 aa12.39□□□□□ -0.43
CCNK-202ENST00000553636 SHISA7A6NL88 538 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 CLDN5O00501 218 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 AKAP3O75969 853 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 HLA-DRAP01903 254 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 KRT13P13646 458 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 PTPN1P18031 435 aaKnown RBP12.38□□□□□ -0.43
CCNK-202ENST00000553636 DDX6P26196 483 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCNK-202ENST00000553636 RPL13P26373 211 aaKnown RBP12.38□□□□□ -0.43
CCNK-202ENST00000553636 AVPR1AP37288 418 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 SOX9P48436 509 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 KPNA1P52294 538 aaPredicted RBP12.38□□□□□ -0.43
CCNK-202ENST00000553636 NFIL3Q16649 462 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 ZCWPW2Q504Y3 356 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 ARHGAP29Q52LW3 1261 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 SPOPLQ6IQ16 392 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 VSTM1Q6UX27 236 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 INTS8Q75QN2 995 aaKnown RBP12.38□□□□□ -0.43
CCNK-202ENST00000553636 SV2AQ7L0J3 742 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 MON1AQ86VX9 555 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 C1orf210Q8IVY1 113 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 CELF5Q8N6W0 485 aaKnown RBP12.38□□□□□ -0.43
CCNK-202ENST00000553636 B3GALNT2Q8NCR0 500 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 TTC16Q8NEE8 873 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 ENGASEQ8NFI3 743 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 FAM3CQ92520 227 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 USP13Q92995 863 aaPredicted RBP12.38□□□□□ -0.43
CCNK-202ENST00000553636 EEF2KMTQ96G04 330 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 MYRFLQ96LU7 910 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 NELL2Q99435 816 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 OSBPL6Q9BZF3 934 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 ZNF518BQ9C0D4 1074 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 SDCBP2Q9H190 292 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 RMND1Q9NWS8 449 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 ZMYM5Q9UJ78 669 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 CCL26Q9Y258 94 aa12.38□□□□□ -0.43
CCNK-202ENST00000553636 F8VP50 259 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 MAN2B1O00754 1011 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 TRIM66O15016 1216 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 MAPK13O15264 365 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 NCAM2O15394 837 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 GFRA3O60609 400 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 SMC2O95347 1197 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 CKMP06732 381 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 FAM163BP0C2L3 166 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 P4HA1P13674 534 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 CCNE1P24864 410 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 WEE1P30291 646 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 PSMC2P35998 433 aaKnown RBP12.37□□□□□ -0.43
CCNK-202ENST00000553636 NBL1P41271 181 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 GCLMP48507 274 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 CACNA2D1P54289 1103 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 USP46P62068 366 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 TNK2Q07912 1038 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 IFRD2Q12894 506 aaPredicted RBP12.37□□□□□ -0.43
CCNK-202ENST00000553636 ORC1Q13415 861 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 ADAM9Q13443 819 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 SGSM1Q2NKQ1 1148 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 DENND5BQ6ZUT9 1274 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 SMARCE1Q969G3 411 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 SPATA17Q96L03 361 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 MED10Q9BTT4 135 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 B3GNT5Q9BYG0 378 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 ELOVL4Q9GZR5 314 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 GTSE1Q9NYZ3 720 aa12.37□□□□□ -0.43
CCNK-202ENST00000553636 TRAV19A0A0A6YYK7 116 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 IKBKBO14920 756 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 LAMTOR5O43504 91 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 ASS1P00966 412 aaKnown RBP12.36□□□□□ -0.43
CCNK-202ENST00000553636 PRCPP42785 496 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 MAGEA9P43362 315 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 PLCB2Q00722 1185 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 PPP3CAQ08209 521 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 EDRF1Q3B7T1 1238 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 ZNF658Q5TYW1 1059 aaPredicted RBP12.36□□□□□ -0.43
CCNK-202ENST00000553636 ACOT1Q86TX2 421 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 FAM35AQ86V20 835 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 RIN3Q8TB24 985 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 TAF4BQ92750 862 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 CLDN23Q96B33 292 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 TNIP3Q96KP6 325 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 C8orf48Q96LL4 319 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 GSDMAQ96QA5 445 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 SLC22A12Q96S37 553 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 IMPG2Q9BZV3 1241 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 KIF9Q9HAQ2 790 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 TDP1Q9NUW8 608 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 TMEM30AQ9NV96 361 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 THG1LQ9NWX6 298 aaKnown RBP12.36□□□□□ -0.43
CCNK-202ENST00000553636 HMGXB4Q9UGU5 601 aa12.36□□□□□ -0.43
CCNK-202ENST00000553636 HOOK1Q9UJC3 728 aaKnown RBP12.36□□□□□ -0.43
CCNK-202ENST00000553636 PCDHA5Q9Y5H7 936 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms