RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 SFTPA1Q8IWL2 248 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 SPRYD3Q8NCJ5 442 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 PNMA5Q96PV4 448 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 PNKPQ96T60 521 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 PCOLCE2Q9UKZ9 415 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 PCDHB5Q9Y5E4 795 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 CYP46A1Q9Y6A2 500 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 PLXND1Q9Y4D7 1925 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 OBSL1O75147 1896 aa14.91□□□□□ -0.02
PRPF39-204ENST00000553605 CEP192Q8TEP8 1941 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 BTBD18B2RXH4 712 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 ADAM23O75077 832 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 PRPF40AO75400 957 aaKnown RBP14.9□□□□□ -0.02
PRPF39-204ENST00000553605 CHRM1P11229 460 aaPredicted RBP14.9□□□□□ -0.02
PRPF39-204ENST00000553605 CCT6AP40227 531 aaKnown RBP14.9□□□□□ -0.02
PRPF39-204ENST00000553605 TNFSF9P41273 254 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 SLC6A11P48066 632 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 ZC2HC1CQ53FD0 456 aaPredicted RBP14.9□□□□□ -0.02
PRPF39-204ENST00000553605 SDHAF4Q5VUM1 108 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 HAUS3Q68CZ6 603 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 ZPBP2Q6X784 338 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 SLC41A1Q8IVJ1 513 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 DCP1BQ8IZD4 617 aaKnown RBP14.9□□□□□ -0.02
PRPF39-204ENST00000553605 ZNF843Q8N446 348 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 ARL14EPQ8N8R7 260 aaPredicted RBP14.9□□□□□ -0.02
PRPF39-204ENST00000553605 LSM14AQ8ND56 463 aaKnown RBP14.9□□□□□ -0.02
PRPF39-204ENST00000553605 PIP4K2CQ8TBX8 421 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 LRRC15Q8TF66 581 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 WASF1Q92558 559 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 DRC1Q96MC2 740 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 DCBLD2Q96PD2 775 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 TSPAN18Q96SJ8 248 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 NTPCRQ9BSD7 190 aaKnown RBP14.9□□□□□ -0.02
PRPF39-204ENST00000553605 PI4K2AQ9BTU6 479 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 HAPLN2Q9GZV7 340 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 ZDHHC4Q9NPG8 344 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 ORC3Q9UBD5 711 aaPredicted RBP14.9□□□□□ -0.02
PRPF39-204ENST00000553605 KIAA1024Q9UPX6 916 aa14.9□□□□□ -0.02
PRPF39-204ENST00000553605 PIRO00625 290 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 CYB561D2O14569 222 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 KAT7O95251 611 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 APODP05090 189 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 TCF3P15923 654 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 HDCP19113 662 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 KIR2DL1P43626 348 aaPredicted RBP14.89□□□□□ -0.03
PRPF39-204ENST00000553605 MESP2Q0VG99 397 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 DDR2Q16832 855 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 C9orf57Q5W0N0 161 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 MARCH9Q86YJ5 346 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 RGL4Q8IZJ4 473 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 TRIML1Q8N9V2 468 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 SPATA18Q8TC71 538 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 SETD7Q8WTS6 366 aaKnown RBP14.89□□□□□ -0.03
PRPF39-204ENST00000553605 TRMT2BQ96GJ1 504 aaKnown RBP14.89□□□□□ -0.03
PRPF39-204ENST00000553605 MYRFLQ96LU7 910 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 HSPA12BQ96MM6 686 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 YTHDC1Q96MU7 727 aaKnown RBP14.89□□□□□ -0.03
PRPF39-204ENST00000553605 FAM124BQ9H5Z6 455 aaPredicted RBP14.89□□□□□ -0.03
PRPF39-204ENST00000553605 C17orf75Q9HAS0 396 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 GCNT4Q9P109 453 aa14.89□□□□□ -0.03
PRPF39-204ENST00000553605 A0A0A0MRY4 1105 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 C2orf78A6NCI8 922 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 SFI1A8K8P3 1242 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 J3QKU1 62 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 NOL4O94818 638 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 TNFRSF4P43489 277 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 MAPK7Q13164 816 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 KCNB1Q14721 858 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 ADGRG2Q8IZP9 1017 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 GALNT15Q8N3T1 639 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 FSIP1Q8NA03 581 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 KIF2CQ99661 725 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 PYM1Q9BRP8 204 aaKnown RBP14.88□□□□□ -0.03
PRPF39-204ENST00000553605 ZDHHC5Q9C0B5 715 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 RPF1Q9H9Y2 349 aaKnown RBP14.88□□□□□ -0.03
PRPF39-204ENST00000553605 DDX19AQ9NUU7 478 aaKnown RBP14.88□□□□□ -0.03
PRPF39-204ENST00000553605 TMLHEQ9NVH6 421 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 SUSD2Q9UGT4 822 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 ARHGAP26Q9UNA1 814 aa14.88□□□□□ -0.03
PRPF39-204ENST00000553605 TSC2P49815 1807 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 IGHV1OR15-9A0A0B4J2B8 117 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 ANO9A1A5B4 782 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 CTDNEP1O95476 244 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 CYP17A1P05093 508 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 ADRB2P07550 413 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 GNSP15586 552 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 GABRG2P18507 467 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 EIF2DP41214 584 aaKnown RBP14.87□□□□□ -0.03
PRPF39-204ENST00000553605 GRIA2P42262 883 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 RPL10AP62906 217 aaKnown RBP14.87□□□□□ -0.03
PRPF39-204ENST00000553605 GRIK2Q13002 908 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 CAMK2BQ13554 666 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 DHCR24Q15392 516 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 SAFBQ15424 915 aaKnown RBP eCLIP14.87□□□□□ -0.03
PRPF39-204ENST00000553605 ENOX2Q16206 610 aaKnown RBP14.87□□□□□ -0.03
PRPF39-204ENST00000553605 KYAT1Q16773 422 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 WSCD1Q658N2 575 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 JADE1Q6IE81 842 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 DIS3L2Q8IYB7 885 aaKnown RBP14.87□□□□□ -0.03
PRPF39-204ENST00000553605 PDCD7Q8N8D1 485 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms