RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 PIRO00625 290 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 PPEF2O14830 753 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 F11P03951 625 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 CYP11A1P05108 521 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 NFICP08651 508 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 HAPLN1P10915 354 aaPredicted RBP12.7□□□□□ -0.38
SRP54-203ENST00000553544 ARSAP15289 507 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 ATF6P18850 670 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 GARTP22102 1010 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 GJA4P35212 333 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 NLRP12P59046 1061 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 DNM1Q05193 864 aaKnown RBP12.7□□□□□ -0.38
SRP54-203ENST00000553544 PSMD2Q13200 908 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 TXNDC8Q6A555 127 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 MON1AQ86VX9 555 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 CCDC65Q8IXS2 484 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 OR10T2Q8NGX3 314 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 SPPL2BQ8TCT7 592 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 POMGNT1Q8WZA1 660 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 MRPS31Q92665 395 aaKnown RBP12.7□□□□□ -0.38
SRP54-203ENST00000553544 DHX58Q96C10 678 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 C7orf25Q9BPX7 421 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 TMEM121BQ9BXQ6 578 aaPredicted RBP12.7□□□□□ -0.38
SRP54-203ENST00000553544 ECT2Q9H8V3 914 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 INVSQ9Y283 1065 aa12.7□□□□□ -0.38
SRP54-203ENST00000553544 DMXL2Q8TDJ6 3036 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 CDX4O14627 284 aaPredicted RBP12.69□□□□□ -0.38
SRP54-203ENST00000553544 POLR2DO15514 142 aaKnown RBP12.69□□□□□ -0.38
SRP54-203ENST00000553544 PRPF6O94906 941 aaKnown RBP12.69□□□□□ -0.38
SRP54-203ENST00000553544 TOP3BO95985 862 aaKnown RBP12.69□□□□□ -0.38
SRP54-203ENST00000553544 CDR1P51861 262 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 IRX4P78413 519 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 AMPD3Q01432 767 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 EHHADHQ08426 723 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 NR1H3Q13133 447 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 ZNF268Q14587 947 aaPredicted RBP12.69□□□□□ -0.38
SRP54-203ENST00000553544 TMEM132DQ14C87 1099 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 UAP1L1Q3KQV9 507 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 C9orf57Q5W0N0 161 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 RESP18Q5W5W9 173 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 TMEM150AQ86TG1 271 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 DCP1BQ8IZD4 617 aaKnown RBP12.69□□□□□ -0.38
SRP54-203ENST00000553544 CPA6Q8N4T0 437 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 GLIS3Q8NEA6 775 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 ZSWIM2Q8NEG5 633 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 TSTD1Q8NFU3 115 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 GATA6Q92908 595 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 CD101Q93033 1021 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 SLC32A1Q9H598 525 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 TMEM206Q9H813 350 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 MAGEF1Q9HAY2 307 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 DUS2Q9NX74 493 aaKnown RBP12.69□□□□□ -0.38
SRP54-203ENST00000553544 ATG2BQ96BY7 2078 aa12.69□□□□□ -0.38
SRP54-203ENST00000553544 DENND4CQ5VZ89 1909 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 CYB561D2O14569 222 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 LDHAP00338 332 aaKnown RBP12.68□□□□□ -0.38
SRP54-203ENST00000553544 CSH1P0DML2 217 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 CSH2P0DML3 217 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 HMGA1P17096 107 aaKnown RBP12.68□□□□□ -0.38
SRP54-203ENST00000553544 RDXP35241 583 aaKnown RBP12.68□□□□□ -0.38
SRP54-203ENST00000553544 HOXD13P35453 343 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 ME1P48163 572 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 WNT7BP56706 349 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 RING1Q06587 406 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 LMAN2Q12907 356 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 PMS2CLQ68D20 193 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 EPM2AIP1Q7L775 607 aaPredicted RBP12.68□□□□□ -0.38
SRP54-203ENST00000553544 CYP2U1Q7Z449 544 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 LRRTM3Q86VH5 581 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 NT5DC4Q86YG4 428 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 BRSK2Q8IWQ3 736 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 EFCAB13Q8IY85 973 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 PIGKQ92643 395 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 ATP2A3Q93084 1043 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 HPS3Q969F9 1004 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 CBWD1Q9BRT8 395 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 ABI2Q9NYB9 513 aaPredicted RBP12.68□□□□□ -0.38
SRP54-203ENST00000553544 LHX6Q9UPM6 363 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 NEUROG3Q9Y4Z2 214 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 PCDHB5Q9Y5E4 795 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 PKD1L2Q7Z442 2459 aa12.68□□□□□ -0.38
SRP54-203ENST00000553544 AKAP13Q12802 2813 aa12.67□□□□□ -0.38
SRP54-203ENST00000553544 IL18RAPO95256 599 aa12.67□□□□□ -0.38
SRP54-203ENST00000553544 DHPSP49366 369 aaPredicted RBP12.67□□□□□ -0.38
SRP54-203ENST00000553544 MTF1Q14872 753 aa12.67□□□□□ -0.38
SRP54-203ENST00000553544 NAIF1Q69YI7 327 aaPredicted RBP12.67□□□□□ -0.38
SRP54-203ENST00000553544 SYCP3Q8IZU3 236 aa12.67□□□□□ -0.38
SRP54-203ENST00000553544 DEFB124Q8NES8 71 aa12.67□□□□□ -0.38
SRP54-203ENST00000553544 ZNF507Q8TCN5 953 aa12.67□□□□□ -0.38
SRP54-203ENST00000553544 OSCP1Q8WVF1 389 aa12.67□□□□□ -0.38
SRP54-203ENST00000553544 ZCCHC14Q8WYQ9 949 aaKnown RBP12.67□□□□□ -0.38
SRP54-203ENST00000553544 EZH1Q92800 747 aaPredicted RBP12.67□□□□□ -0.38
SRP54-203ENST00000553544 SAAL1Q96ER3 474 aa12.67□□□□□ -0.38
SRP54-203ENST00000553544 PYM1Q9BRP8 204 aaKnown RBP12.67□□□□□ -0.38
SRP54-203ENST00000553544 FAM213AQ9BRX8 229 aa12.67□□□□□ -0.38
SRP54-203ENST00000553544 DPP3Q9NY33 737 aa12.67□□□□□ -0.38
SRP54-203ENST00000553544 FAM13BQ9NYF5 915 aa12.67□□□□□ -0.38
SRP54-203ENST00000553544 UXTQ9UBK9 157 aaPredicted RBP12.67□□□□□ -0.38
SRP54-203ENST00000553544 MAGED2Q9UNF1 606 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms