RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 FBXW10Q5XX13 1052 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 ICE2Q659A1 982 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 TRIM50Q86XT4 487 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 XYLT1Q86Y38 959 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 PPIL6Q8IXY8 311 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 C1orf127Q8N9H9 656 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 CMASQ8NFW8 434 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-205ENST00000553474 MAML1Q92585 1016 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 MCRS1Q96EZ8 462 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 TMEM176AQ96HP8 235 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 ELAC2Q9BQ52 826 aaKnown RBP13.56□□□□□ -0.24
SHMT2-205ENST00000553474 SYNCQ9H7C4 482 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 RSAD1Q9HA92 442 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 SAYSD1Q9NPB0 183 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 ASNSD1Q9NWL6 643 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 ITGA11Q9UKX5 1188 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 C2CD2Q9Y426 696 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 CITO14578 2027 aa13.56□□□□□ -0.24
SHMT2-205ENST00000553474 APOC4-APOC2K7ER74 178 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 SGK1O00141 431 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 CA12O43570 354 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 GJB6O95452 261 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 APOC2P02655 101 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 CXCL8P10145 99 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 TCF4P15884 667 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 PECAM1P16284 738 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-205ENST00000553474 KDELR1P24390 212 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 IFNAR2P48551 515 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 PLCB3Q01970 1234 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 INCA1Q0VD86 236 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 MYO1EQ12965 1108 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 HIF1AQ16665 826 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 SWT1Q5T5J6 900 aaKnown RBP13.55□□□□□ -0.24
SHMT2-205ENST00000553474 DENND1BQ6P3S1 775 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 SCARA5Q6ZMJ2 495 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 RGS9BPQ6ZS82 235 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 TRABD2AQ86V40 505 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 VSIG1Q86XK7 387 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 SLC4A11Q8NBS3 891 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 AFG1LQ8WV93 481 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 EMID1Q96A84 441 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-205ENST00000553474 C9orf72Q96LT7 481 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 IFT122Q9HBG6 1241 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 KLC4Q9NSK0 619 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 RNF186Q9NXI6 227 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 NXF1Q9UBU9 619 aaKnown RBP13.55□□□□□ -0.24
SHMT2-205ENST00000553474 SIX4Q9UIU6 781 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.55□□□□□ -0.24
SHMT2-205ENST00000553474 ARL2BPQ9Y2Y0 163 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 FARP1Q9Y4F1 1045 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-205ENST00000553474 PLXNA1Q9UIW2 1896 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 TCP11X1B4DZS4 312 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 CAPN15O75808 1086 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 PGK2P07205 417 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 KRT19P08727 400 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 STAG3L1P0CL83 205 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 STIP1P31948 543 aaKnown RBP13.55□□□□□ -0.24
SHMT2-205ENST00000553474 SNX16P57768 344 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 ACVR2BQ13705 512 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 CYP4A22Q5TCH4 519 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 EEF1DP3Q658K8 133 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 NUGGCQ68CJ6 796 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 APBB1IPQ7Z5R6 666 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-205ENST00000553474 SRRM1Q8IYB3 904 aaKnown RBP13.55□□□□□ -0.24
SHMT2-205ENST00000553474 LINC01465Q8N7H1 131 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 GPRC5AQ8NFJ5 357 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 CXorf38Q8TB03 319 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 PRCCQ92733 491 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-205ENST00000553474 BEGAINQ9BUH8 593 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 R3HDMLQ9H3Y0 253 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 SLC40A1Q9NP59 571 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 VTA1Q9NP79 307 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 DNAJC17Q9NVM6 304 aaKnown RBP13.55□□□□□ -0.24
SHMT2-205ENST00000553474 KLHL11Q9NVR0 708 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 HAUS2Q9NVX0 235 aa13.55□□□□□ -0.24
SHMT2-205ENST00000553474 DOCK3Q8IZD9 2030 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 E7ESA3 106 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 B4GALT5O43286 388 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 CST8O60676 142 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 ARL4CP56559 192 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 KLHL38Q2WGJ6 581 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 Q3C1V9 767 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 FAM47CQ5HY64 1035 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 SPATA21Q7Z572 469 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 FBXO16Q8IX29 292 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-205ENST00000553474 FUKQ8N0W3 1084 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 ATP11CQ8NB49 1132 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 ACTL9Q8TC94 416 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 MAGEC3Q8TD91 643 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 RSAD2Q8WXG1 361 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 CPXM1Q96SM3 734 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 FAM118BQ9BPY3 351 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 TMEM121Q9BTD3 319 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 FRMD8Q9BZ67 464 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-205ENST00000553474 PSMC3IPQ9P2W1 217 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-205ENST00000553474 CTNNAL1Q9UBT7 734 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 BARX2Q9UMQ3 279 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-205ENST00000553474 RALGAPA2Q2PPJ7 1873 aa13.54□□□□□ -0.24
SHMT2-205ENST00000553474 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-205ENST00000553474 LACTBL1A8MY62 500 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms