RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 WHAMMQ8TF30 809 aa12.58□□□□□ -0.4
HNRNPC-206ENST00000553444 FIZ1Q96SL8 496 aa12.58□□□□□ -0.4
HNRNPC-206ENST00000553444 PKMYT1Q99640 499 aa12.58□□□□□ -0.4
HNRNPC-206ENST00000553444 REEP2Q9BRK0 252 aa12.58□□□□□ -0.4
HNRNPC-206ENST00000553444 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-206ENST00000553444 MBD1Q9UIS9 605 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-206ENST00000553444 KIF26AQ9ULI4 1882 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-206ENST00000553444 ODF2LQ9ULJ1 636 aa12.58□□□□□ -0.4
HNRNPC-206ENST00000553444 DPP6P42658 865 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 FAM193AP78312 1265 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 MRPS21P82921 87 aaKnown RBP12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 ZXDBP98169 803 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 KCNB1Q14721 858 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 MAP7D1Q3KQU3 841 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 SV2CQ496J9 727 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 INTS6LQ5JSJ4 861 aaKnown RBP12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 SPDYCQ5MJ68 293 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 PEAR1Q5VY43 1037 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 LYSMD4Q5XG99 296 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 LMBRD2Q68DH5 695 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 SFTPA1Q8IWL2 248 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 CHCHD4Q8N4Q1 142 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 MYCT1Q8N699 235 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 FRMD1Q8N878 549 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 TXNDC5Q8NBS9 432 aaKnown RBP12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 LRRC15Q8TF66 581 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 SPACA7Q96KW9 195 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 ZNF560Q96MR9 790 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 ACBD6Q9BR61 282 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 FSCN3Q9NQT6 498 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 PILRBQ9UKJ0 227 aa12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 CIZ1Q9ULV3 898 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 SMG1Q96Q15 3661 aaKnown RBP12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 ATXN2Q99700 1313 aaKnown RBP12.57□□□□□ -0.4
HNRNPC-206ENST00000553444 ABCA7Q8IZY2 2146 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 TISP43B9A030 160 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 ANKRD63C9JTQ0 380 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 SGK1O00141 431 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 MAP3K13O43283 966 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 KLF8O95600 359 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 CYP17A1P05093 508 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 HDCP19113 662 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 ACAT1P24752 427 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 HOXD12P35452 270 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 PNPLA4P41247 253 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 HMGN5P82970 282 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 ATP2C1P98194 919 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 GTF2BQ00403 316 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 POU5F1Q01860 360 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 MESP2Q0VG99 397 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 CCDC142Q17RM4 750 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 CFAP221Q4G0U5 840 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 ADALQ6DHV7 355 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 ALLCQ8N6M5 410 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 IL17RCQ8NAC3 791 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 PARVGQ9HBI0 331 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 DDX43Q9NXZ2 648 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 L1RE1Q9UN81 338 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 LIMCH1Q9UPQ0 1083 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 GPSM3Q9Y4H4 160 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 STYXL1Q9Y6J8 313 aa12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 ASCC3Q8N3C0 2202 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-206ENST00000553444 CITO14578 2027 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 LAMA5O15230 3695 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 LEFTY2O00292 366 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 TRAK2O60296 914 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 FAM13AO94988 1023 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 CFIP05156 583 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 NEFLP07196 543 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 ITPKAP23677 461 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 ZNF423Q2M1K9 1284 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 HSF5Q4G112 596 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 SOWAHCQ53LP3 525 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 CRELD2Q6UXH1 353 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 RAB44Q7Z6P3 723 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 OSTM1Q86WC4 334 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 GPBP1Q86WP2 473 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 HDDC3Q8N4P3 179 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 KIAA1958Q8N8K9 716 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 FSIP1Q8NA03 581 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 FAM184AQ8NB25 1140 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 SPATA18Q8TC71 538 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 FUBP3Q96I24 572 aaKnown RBP eCLIP12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 CDK5RAP3Q96JB5 506 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 GTPBP2Q9BX10 602 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 CAPN10Q9HC96 672 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 POLMQ9NP87 494 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 GTF3C4Q9UKN8 822 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 AGO2Q9UKV8 859 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 GTF3C3Q9Y5Q9 886 aa12.55□□□□□ -0.4
HNRNPC-206ENST00000553444 VWA3AA6NCI4 1184 aa12.54□□□□□ -0.4
HNRNPC-206ENST00000553444 MYMKA6NI61 221 aa12.54□□□□□ -0.4
HNRNPC-206ENST00000553444 ADAM23O75077 832 aa12.54□□□□□ -0.4
HNRNPC-206ENST00000553444 KAT7O95251 611 aa12.54□□□□□ -0.4
HNRNPC-206ENST00000553444 PFKLP17858 780 aa12.54□□□□□ -0.4
HNRNPC-206ENST00000553444 POLR2BP30876 1174 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-206ENST00000553444 ABCD1P33897 745 aa12.54□□□□□ -0.4
HNRNPC-206ENST00000553444 RDXP35241 583 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-206ENST00000553444 TIE1P35590 1138 aa12.54□□□□□ -0.4
HNRNPC-206ENST00000553444 MAGEA11P43364 429 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms