RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 CCINQ13939 588 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 PDGFRLQ15198 375 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 SDHAF4Q5VUM1 108 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 TXNDC8Q6A555 127 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 CCDC73Q6ZRK6 1079 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 ZNF720Q7Z2F6 126 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 CACNA2D4Q7Z3S7 1137 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 WDR5BQ86VZ2 330 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 BRSK2Q8IWQ3 736 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 ADGRF2Q8IZF7 708 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 TMEM86AQ8N2M4 240 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 PDCL2Q8N4E4 241 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 CSGALNACT2Q8N6G5 542 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 LRRC15Q8TF66 581 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 DDX1Q92499 740 aaKnown RBP10.64□□□□□ -0.71
ACTN1-208ENST00000553370 KCNN1Q92952 543 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 CNTNAP3BQ96NU0 1288 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 MKNK1Q9BUB5 465 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 SLC46A2Q9BY10 475 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 CNTNAP3Q9BZ76 1288 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 CCSER1Q9C0I3 900 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 ST6GALNAC4Q9H4F1 302 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 KIAA1468Q9P260 1216 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 ITGA11Q9UKX5 1188 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 CCL26Q9Y258 94 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 SNX9Q9Y5X1 595 aa10.64□□□□□ -0.71
ACTN1-208ENST00000553370 K7ESF4 209 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 EXTL3O43909 919 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 RNF40O75150 1001 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 USP17L7P0C7H9 530 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 HOXB1P14653 301 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-208ENST00000553370 DRD1P21728 446 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 CYP2F1P24903 491 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 PDE6CP51160 858 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 RBP5P82980 135 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 POU5F1Q01860 360 aaKnown RBP10.63□□□□□ -0.71
ACTN1-208ENST00000553370 NR1H3Q13133 447 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 MTF1Q14872 753 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 ELF2Q15723 593 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 CCDC6Q16204 474 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 DDR2Q16832 855 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 INTS6LQ5JSJ4 861 aaKnown RBP10.63□□□□□ -0.71
ACTN1-208ENST00000553370 C4orf50Q6ZRC1 276 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 LRRTM3Q86VH5 581 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 CCDC65Q8IXS2 484 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 LRRC52Q8N7C0 313 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 GAB3Q8WWW8 586 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 USP13Q92995 863 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-208ENST00000553370 ATP2A3Q93084 1043 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 ACDQ96AP0 544 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 LRRC3BQ96PB8 259 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 HHIPQ96QV1 700 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 FIZ1Q96SL8 496 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 P2RY13Q9BPV8 354 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 MTMR12Q9C0I1 747 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 ARRDC1-AS1Q9H2J1 176 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 IKZF4Q9H2S9 585 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 PCIF1Q9H4Z3 704 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 TMEM206Q9H813 350 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 IL21Q9HBE4 155 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 ABCB6Q9NP58 842 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 PANK4Q9NVE7 773 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 DUS2Q9NX74 493 aaKnown RBP10.63□□□□□ -0.71
ACTN1-208ENST00000553370 L1RE1Q9UN81 338 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 CLIC4Q9Y696 253 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 STYXL1Q9Y6J8 313 aa10.63□□□□□ -0.71
ACTN1-208ENST00000553370 CACNA1GO43497 2377 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 USP24Q9UPU5 2620 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 KMT2BQ9UMN6 2715 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-208ENST00000553370 EGFP01133 1207 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 ARSAP15289 507 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 GARTP22102 1010 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 GBP1P32455 592 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 LHX1P48742 406 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 CYP27A1Q02318 531 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 PDE4CQ08493 712 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 FSTL4Q6MZW2 842 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 USP49Q70CQ1 688 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 MON1AQ86VX9 555 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 TTC30AQ86WT1 665 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 C1orf127Q8N9H9 656 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 RPLP0P6Q8NHW5 317 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 CCDC26Q8TAB7 109 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 LEO1Q8WVC0 666 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-208ENST00000553370 CLIC6Q96NY7 704 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 MMS19Q96T76 1030 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 ACBD6Q9BR61 282 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 PANK2Q9BZ23 570 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 HPS4Q9NQG7 708 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 TMLHEQ9NVH6 421 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 C2orf42Q9NWW7 574 aa10.62□□□□□ -0.71
ACTN1-208ENST00000553370 ASCC3Q8N3C0 2202 aaKnown RBP10.62□□□□□ -0.71
ACTN1-208ENST00000553370 MYMKA6NI61 221 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 GDF9O60383 454 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 PRPF6O94906 941 aaKnown RBP10.61□□□□□ -0.71
ACTN1-208ENST00000553370 NFATC1O95644 943 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 ABL1P00519 1130 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 F11P03951 625 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 ADRB1P08588 477 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 HMGA1P17096 107 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms