RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 DOCK6Q96HP0 2047 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 NOTCH4Q99466 2003 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 DOCK8Q8NF50 2099 aa16.33■□□□□ 0.2
SHMT2-204ENST00000553324 GOLGA6L22H0YM25 854 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 ASPAP45381 313 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 CETN1Q12798 172 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 SDHAF4Q5VUM1 108 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 SPOPLQ6IQ16 392 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 TTI2Q6NXR4 508 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 DENND5BQ6ZUT9 1274 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 YAF2Q8IY57 180 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 FLCNQ8NFG4 579 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 DNASE1L2Q92874 299 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 PLA2G2FQ9BZM2 168 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 DPEP3Q9H4B8 488 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 BRD9Q9H8M2 597 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 CA14Q9ULX7 337 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 COQ4Q9Y3A0 265 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 NME7Q9Y5B8 376 aa16.32■□□□□ 0.2
SHMT2-204ENST00000553324 TSC2P49815 1807 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 KRBA1A5PL33 1030 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 HEPACAM2A8MVW5 462 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 NRG2O14511 850 aaPredicted RBP16.31■□□□□ 0.2
SHMT2-204ENST00000553324 ZNF263O14978 683 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 PMM2O15305 246 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 PDGFBP01127 241 aaPredicted RBP16.31■□□□□ 0.2
SHMT2-204ENST00000553324 PFKLP17858 780 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 AVPR1AP37288 418 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 VIPR2P41587 438 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 RAP1GAPP47736 663 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 PDE6CP51160 858 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 NDST1P52848 882 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 STARD6P59095 220 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 INCA1Q0VD86 236 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 CCDC40Q4G0X9 1142 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 ACOT1Q86TX2 421 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 MON1AQ86VX9 555 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 CMTM8Q8IZV2 173 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 MLKLQ8NB16 471 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 DUSP9Q99956 384 aaKnown RBP16.31■□□□□ 0.2
SHMT2-204ENST00000553324 MED10Q9BTT4 135 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 NT5C1AQ9BXI3 368 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 SLC46A2Q9BY10 475 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 B3GNT5Q9BYG0 378 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 SDCBP2Q9H190 292 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 IRF2BPLQ9H1B7 796 aa16.31■□□□□ 0.2
SHMT2-204ENST00000553324 APOBEC3GQ9HC16 384 aaKnown RBP16.31■□□□□ 0.2
SHMT2-204ENST00000553324 THG1LQ9NWX6 298 aaKnown RBP16.31■□□□□ 0.2
SHMT2-204ENST00000553324 F8VP50 259 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 CHADO15335 359 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 P4HA2O15460 535 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 GLULP15104 373 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 NPR3P17342 541 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 AOC1P19801 751 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 GDI1P31150 447 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 CYP4F8P98187 520 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 FCHO2Q0JRZ9 810 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 MLF2Q15773 248 aaPredicted RBP16.3■□□□□ 0.2
SHMT2-204ENST00000553324 CCDC142Q17RM4 750 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 STXBP5Q5T5C0 1151 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 VITQ6UXI7 678 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 TMEM150AQ86TG1 271 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 NUP93Q8N1F7 819 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 CELF5Q8N6W0 485 aaKnown RBP16.3■□□□□ 0.2
SHMT2-204ENST00000553324 SLC35C1Q96A29 364 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 SMARCD1Q96GM5 515 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 NELL2Q99435 816 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 ZNF518BQ9C0D4 1074 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 CLSTN2Q9H4D0 955 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 COMMD8Q9NX08 183 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 TRPM5Q9NZQ8 1165 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 RWDD2AQ9UIY3 292 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 CTNND2Q9UQB3 1225 aa16.3■□□□□ 0.2
SHMT2-204ENST00000553324 RTN3O95197 1032 aaPredicted RBP16.29■□□□□ 0.2
SHMT2-204ENST00000553324 CCDC192P0DO97 292 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 MLLT6P55198 1093 aaPredicted RBP16.29■□□□□ 0.2
SHMT2-204ENST00000553324 PLCB2Q00722 1185 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 GRM2Q14416 872 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 CBWD6Q4V339 395 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 ARHGAP29Q52LW3 1261 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 CBWD3Q5JTY5 395 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 CBWD5Q5RIA9 395 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 C1orf228Q6PIY5 440 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 MAB21L3Q8N8X9 362 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 SEMA4DQ92854 862 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 ELMO3Q96BJ8 720 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 SLITRK1Q96PX8 696 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 TTLL2Q9BWV7 592 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 SRRTQ9BXP5 876 aaKnown RBP16.29■□□□□ 0.2
SHMT2-204ENST00000553324 TBC1D17Q9HA65 648 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 KIF9Q9HAQ2 790 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 DMAP1Q9NPF5 467 aaPredicted RBP16.29■□□□□ 0.2
SHMT2-204ENST00000553324 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.29■□□□□ 0.2
SHMT2-204ENST00000553324 LMBRD1Q9NUN5 540 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 TDP1Q9NUW8 608 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 MRPS17Q9Y2R5 130 aaKnown RBP16.29■□□□□ 0.2
SHMT2-204ENST00000553324 SIT1Q9Y3P8 196 aa16.29■□□□□ 0.2
SHMT2-204ENST00000553324 TRAV19A0A0A6YYK7 116 aa16.28■□□□□ 0.2
SHMT2-204ENST00000553324 KANSL1LA0AUZ9 987 aa16.28■□□□□ 0.2
SHMT2-204ENST00000553324 CLDN5O00501 218 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms