RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 ALDH1A1P00352 501 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 CCDC130P13994 396 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 MLH1P40692 756 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 IFFO1Q0D2I5 559 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 STILQ15468 1287 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 TFDP3Q5H9I0 405 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 PMF1Q6P1K2 205 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 ZNF365Q70YC5 407 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 TTC30AQ86WT1 665 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 NIPA2Q8N8Q9 360 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 SMC1BQ8NDV3 1235 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 APPL2Q8NEU8 664 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 HSPH1Q92598 858 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 LPPQ93052 612 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 MIS12Q9H081 205 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 SNX25Q9H3E2 840 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 KIAA1257Q9ULG3 409 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 PIRO00625 290 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 PFKMP08237 780 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 LMO2P25791 158 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 IL1R2P27930 398 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 ADCY8P40145 1251 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 THPOP40225 353 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 DRG2P55039 364 aaKnown RBP9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 ATP11AP98196 1134 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 PLCB3Q01970 1234 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 SLC25A11Q02978 314 aaKnown RBP9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 KCNA10Q16322 511 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 C15orf59Q2T9L4 293 aaPredicted RBP9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 LRRC38Q5VT99 294 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 PRUNE1Q86TP1 453 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 ARFGAP1Q8N6T3 406 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 RNF169Q8NCN4 708 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 ATL2Q8NHH9 583 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 MCRS1Q96EZ8 462 aa9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 DDX56Q9NY93 547 aaKnown RBP9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 BCCIPQ9P287 314 aaKnown RBP eCLIP9.56□□□□□ -0.88
RAB3IP-218ENST00000553099 HUS1O60921 280 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 KRT7P08729 469 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 FGFR1P11362 822 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 ATF2P15336 505 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 KCNE1P15382 129 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 PDGFRAP16234 1089 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 CAPN2P17655 700 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 GBP1P32455 592 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 GNL1P36915 607 aaPredicted RBP9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 PNPLA4P41247 253 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 GABRB2P47870 512 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 PMS2P54278 862 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 CCNG2Q16589 344 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 SV2CQ496J9 727 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 SH3PXD2AQ5TCZ1 1133 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 UHMK1Q8TAS1 419 aaKnown RBP9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 FNIP1Q8TF40 1166 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 KBTBD7Q8WVZ9 684 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 FAM124BQ9H5Z6 455 aaPredicted RBP9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 HOMER3Q9NSC5 361 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 FAM105AQ9NUU6 356 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 DNAJC17Q9NVM6 304 aaKnown RBP9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 FEZ2Q9UHY8 353 aaPredicted RBP9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 DNPEPQ9ULA0 475 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 ZNF148Q9UQR1 794 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 NOD1Q9Y239 953 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 hCG_1818297A0A087WSY0 165 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 PTGESO14684 152 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 ADAMTS4O75173 837 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 PPFIA2O75334 1257 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 CHRNA1P02708 482 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 MYZAPP0CAP1 466 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 GPD1P21695 349 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 MIPP30301 263 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 GSCP56915 257 aaPredicted RBP9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 SP3Q02447 781 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 PPARDQ03181 441 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 TAF5Q15542 800 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 PTGISQ16647 500 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 UNC93AQ86WB7 457 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 SCUBE3Q8IX30 993 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 ADGRF2Q8IZF7 708 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 RXFP2Q8WXD0 754 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 SLCO2A1Q92959 643 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 SNF8Q96H20 258 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 CFAP57Q96MR6 1250 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 GAD1Q99259 594 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 CALN1Q9BXU9 219 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 B3GNT5Q9BYG0 378 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 ASNSD1Q9NWL6 643 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 RNF186Q9NXI6 227 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 SAE1Q9UBE0 346 aaPredicted RBP9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 USP18Q9UMW8 372 aa9.55□□□□□ -0.88
RAB3IP-218ENST00000553099 TDRD15B5MCY1 1934 aaKnown RBP9.54□□□□□ -0.88
RAB3IP-218ENST00000553099 CD48P09326 243 aa9.54□□□□□ -0.88
RAB3IP-218ENST00000553099 GHRP10912 638 aa9.54□□□□□ -0.88
RAB3IP-218ENST00000553099 ACAT1P24752 427 aaKnown RBP9.54□□□□□ -0.88
RAB3IP-218ENST00000553099 CDKN2BP42772 138 aa9.54□□□□□ -0.88
RAB3IP-218ENST00000553099 ATP1A2P50993 1020 aa9.54□□□□□ -0.88
RAB3IP-218ENST00000553099 AFF1P51825 1210 aaKnown RBP9.54□□□□□ -0.88
RAB3IP-218ENST00000553099 LILRA4P59901 499 aa9.54□□□□□ -0.88
RAB3IP-218ENST00000553099 ZNF844Q08AG5 666 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms