RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ITGA11Q9UKX5 1188 aa12.71□□□□□ -0.37
CKAP4-202ENST00000552828 MAGED2Q9UNF1 606 aaPredicted RBP12.71□□□□□ -0.37
CKAP4-202ENST00000552828 PCDHB13Q9Y5F0 798 aa12.71□□□□□ -0.37
CKAP4-202ENST00000552828 CFAP47Q6ZTR5 3102 aa12.71□□□□□ -0.38
CKAP4-202ENST00000552828 A0A087X0B3 334 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 FRMD3A2A2Y4 597 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 USP17L7P0C7H9 530 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 CCDC192P0DO97 292 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 TCF3P15923 654 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 PMLP29590 882 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 MAGEA11P43364 429 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 LHX1P48742 406 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 RBP5P82980 135 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 SHC2P98077 582 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 MYL7Q01449 175 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 USP4Q13107 963 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 MTF1Q14872 753 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 ST3GAL2Q16842 350 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 EML3Q32P44 896 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 PLK5Q496M5 336 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 STPG1Q5TH74 334 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 SDHAF4Q5VUM1 108 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 NAIF1Q69YI7 327 aaPredicted RBP12.7□□□□□ -0.38
CKAP4-202ENST00000552828 SCARA3Q6AZY7 606 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 FAM171BQ6P995 826 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 CPA6Q8N4T0 437 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 CSGALNACT2Q8N6G5 542 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 C12orf50Q8NA57 414 aaPredicted RBP12.7□□□□□ -0.38
CKAP4-202ENST00000552828 STKLD1Q8NE28 680 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 EZH1Q92800 747 aaPredicted RBP12.7□□□□□ -0.38
CKAP4-202ENST00000552828 ATP2A3Q93084 1043 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 SAAL1Q96ER3 474 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 CEP295NLQ96MC4 621 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 SLC22A12Q96S37 553 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 CYP2S1Q96SQ9 504 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 CUEDC2Q9H467 287 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 RXFP3Q9NSD7 469 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 POLR3BQ9NW08 1133 aaPredicted RBP12.7□□□□□ -0.38
CKAP4-202ENST00000552828 DUS2Q9NX74 493 aaKnown RBP12.7□□□□□ -0.38
CKAP4-202ENST00000552828 RBAKQ9NYW8 714 aaPredicted RBP12.7□□□□□ -0.38
CKAP4-202ENST00000552828 GCNT4Q9P109 453 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 SIX4Q9UIU6 781 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 GTF3C4Q9UKN8 822 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 ANK1P16157 1881 aa12.7□□□□□ -0.38
CKAP4-202ENST00000552828 TRAV19A0A0A6YYK7 116 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 POLR2DO15514 142 aaKnown RBP12.69□□□□□ -0.38
CKAP4-202ENST00000552828 CMA1P23946 247 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 ACAT1P24752 427 aaKnown RBP12.69□□□□□ -0.38
CKAP4-202ENST00000552828 PCSK1P29120 753 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 AMPD3Q01432 767 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 ALCAMQ13740 583 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 CCDC6Q16204 474 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 SOWAHAQ2M3V2 549 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 N4BP2L1Q5TBK1 243 aaPredicted RBP12.69□□□□□ -0.38
CKAP4-202ENST00000552828 DPH6Q7L8W6 267 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 OSTM1Q86WC4 334 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 CD101Q93033 1021 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 DHX58Q96C10 678 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 SPATA17Q96L03 361 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 LSM14BQ9BX40 385 aaKnown RBP12.69□□□□□ -0.38
CKAP4-202ENST00000552828 LRRC27Q9C0I9 530 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 DUSP15Q9H1R2 295 aaPredicted RBP12.69□□□□□ -0.38
CKAP4-202ENST00000552828 VPS45Q9NRW7 570 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 CHMP5Q9NZZ3 219 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 ANGPTL2Q9UKU9 493 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 SNX9Q9Y5X1 595 aa12.69□□□□□ -0.38
CKAP4-202ENST00000552828 GCNT3O95395 438 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 APBB3O95704 486 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 PFKLP17858 780 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 MPLP40238 635 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 CASP5P51878 434 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 E2F4Q16254 413 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 CCDC142Q17RM4 750 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 SPATA2LQ8IUW3 424 aaPredicted RBP12.68□□□□□ -0.38
CKAP4-202ENST00000552828 ADGRF2Q8IZF7 708 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 KIAA1958Q8N8K9 716 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 FSIP1Q8NA03 581 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 RPLP0P6Q8NHW5 317 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 CCDC26Q8TAB7 109 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 ACDQ96AP0 544 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 HHIPQ96QV1 700 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 CBWD1Q9BRT8 395 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 TNMDQ9H2S6 317 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 MAGEF1Q9HAY2 307 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 GDPD2Q9HCC8 539 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 PDE11AQ9HCR9 933 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 TBC1D7Q9P0N9 293 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 ARHGAP26Q9UNA1 814 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 WNT6Q9Y6F9 365 aa12.68□□□□□ -0.38
CKAP4-202ENST00000552828 FRYQ5TBA9 3013 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 A0A1B0GVL5 298 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 A0A1W2PQ27 194 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 A0A1W2PQ64 194 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 A0A1W2PQD8 194 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 C2orf78A6NCI8 922 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 GOLGA6L4A6NEF3 574 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 KIAA0391O15091 583 aaKnown RBP12.67□□□□□ -0.38
CKAP4-202ENST00000552828 HCRTO43612 131 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 RHOBTB1O94844 696 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 CKMP06732 381 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms