RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 USP46P62068 366 aa19.18■□□□□ 0.66
PRPF40B-215ENST00000551418 FAM160A1Q05DH4 1040 aa19.18■□□□□ 0.66
PRPF40B-215ENST00000551418 SLC39A14Q15043 492 aa19.18■□□□□ 0.66
PRPF40B-215ENST00000551418 PDGFRLQ15198 375 aa19.18■□□□□ 0.66
PRPF40B-215ENST00000551418 EML3Q32P44 896 aa19.18■□□□□ 0.66
PRPF40B-215ENST00000551418 CACNA2D4Q7Z3S7 1137 aa19.18■□□□□ 0.66
PRPF40B-215ENST00000551418 GPD1LQ8N335 351 aa19.18■□□□□ 0.66
PRPF40B-215ENST00000551418 TOP6BLQ8N6T0 577 aa19.18■□□□□ 0.66
PRPF40B-215ENST00000551418 RPLP0P6Q8NHW5 317 aa19.18■□□□□ 0.66
PRPF40B-215ENST00000551418 OSCP1Q8WVF1 389 aa19.18■□□□□ 0.66
PRPF40B-215ENST00000551418 ABCA7Q8IZY2 2146 aa19.18■□□□□ 0.66
PRPF40B-215ENST00000551418 PTPRDP23468 1912 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 TRAV19A0A0A6YYK7 116 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 SOBPA7XYQ1 873 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 TM4SF5O14894 197 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 EPN2O95208 641 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 CKMP06732 381 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 USP17L7P0C7H9 530 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 CCDC192P0DO97 292 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 TXLNAP40222 546 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 LHX1P48742 406 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 USP4Q13107 963 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 CFAP221Q4G0U5 840 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 CCDC73Q6ZRK6 1079 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 SH3RF2Q8TEC5 729 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 HPDLQ96IR7 371 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 SYT15Q9BQS2 421 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 UXTQ9UBK9 157 aaPredicted RBP19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 MTMR6Q9Y217 621 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 INVSQ9Y283 1065 aa19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 HELZP42694 1942 aaKnown RBP19.17■□□□□ 0.66
PRPF40B-215ENST00000551418 MYOFQ9NZM1 2061 aa19.16■□□□□ 0.66
PRPF40B-215ENST00000551418 CCDC163A0A0D9SF12 145 aa19.16■□□□□ 0.66
PRPF40B-215ENST00000551418 ATG13O75143 517 aa19.16■□□□□ 0.66
PRPF40B-215ENST00000551418 ZNF806P0C7X5 589 aa19.16■□□□□ 0.66
PRPF40B-215ENST00000551418 DRD1P21728 446 aa19.16■□□□□ 0.66
PRPF40B-215ENST00000551418 BDNFP23560 247 aa19.16■□□□□ 0.66
PRPF40B-215ENST00000551418 AASDHQ4L235 1098 aaPredicted RBP19.16■□□□□ 0.66
PRPF40B-215ENST00000551418 TCEAL6Q6IPX3 200 aa19.16■□□□□ 0.66
PRPF40B-215ENST00000551418 CPA6Q8N4T0 437 aa19.16■□□□□ 0.66
PRPF40B-215ENST00000551418 TCEAL3Q969E4 200 aa19.16■□□□□ 0.66
PRPF40B-215ENST00000551418 MYLPFQ96A32 169 aa19.16■□□□□ 0.66
PRPF40B-215ENST00000551418 TMEM206Q9H813 350 aa19.16■□□□□ 0.66
PRPF40B-215ENST00000551418 SCAMP3O14828 347 aaKnown RBP19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 CST3P01034 146 aaPredicted RBP19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 HDCP19113 662 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 PDCP20941 246 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 PCSK1P29120 753 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 MAGEA11P43364 429 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 IFNAR2P48551 515 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 PSMD2Q13200 908 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 ALCAMQ13740 583 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 GAB4Q2WGN9 574 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 PLK5Q496M5 336 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 PLA2G2CQ5R387 149 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 SFTPA1Q8IWL2 248 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 RDH13Q8NBN7 331 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 CD101Q93033 1021 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 FUBP3Q96I24 572 aaKnown RBP eCLIP19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 ANKRD36BP1Q96IX9 119 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 LOXL4Q96JB6 756 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 MRPL45Q9BRJ2 306 aaKnown RBP19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 DUSP15Q9H1R2 295 aaPredicted RBP19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 TMEM30AQ9NV96 361 aa19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 MAGEC2Q9UBF1 373 aaPredicted RBP19.15■□□□□ 0.66
PRPF40B-215ENST00000551418 ZNF233A6NK53 670 aa19.14■□□□□ 0.65
PRPF40B-215ENST00000551418 CACNA2D1P54289 1103 aa19.14■□□□□ 0.65
PRPF40B-215ENST00000551418 DMC1Q14565 340 aa19.14■□□□□ 0.65
PRPF40B-215ENST00000551418 E2F4Q16254 413 aa19.14■□□□□ 0.65
PRPF40B-215ENST00000551418 CCDC65Q8IXS2 484 aa19.14■□□□□ 0.65
PRPF40B-215ENST00000551418 CAMKK1Q8N5S9 505 aa19.14■□□□□ 0.65
PRPF40B-215ENST00000551418 SPATA18Q8TC71 538 aa19.14■□□□□ 0.65
PRPF40B-215ENST00000551418 ZC3H10Q96K80 434 aaKnown RBP19.14■□□□□ 0.65
PRPF40B-215ENST00000551418 RNF38Q9H0F5 515 aa19.14■□□□□ 0.65
PRPF40B-215ENST00000551418 HSPBP1Q9NZL4 362 aa19.14■□□□□ 0.65
PRPF40B-215ENST00000551418 TFIP11Q9UBB9 837 aaKnown RBP19.14■□□□□ 0.65
PRPF40B-215ENST00000551418 CDH9Q9ULB4 789 aa19.14■□□□□ 0.65
PRPF40B-215ENST00000551418 TGFB1I1O43294 461 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 TNNC2P02585 160 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 WARSP23381 471 aaKnown RBP19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 GRIK1P39086 918 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 OPRD1P41143 372 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 AMPD2Q01433 879 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 CYP27A1Q02318 531 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 MESP2Q0VG99 397 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 MYO1EQ12965 1108 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 DUOXA2Q1HG44 320 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 N4BP2L1Q5TBK1 243 aaPredicted RBP19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 STPG1Q5TH74 334 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 SYT13Q7L8C5 426 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 DPH6Q7L8W6 267 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 TRAPPC11Q7Z392 1133 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 C12orf50Q8NA57 414 aaPredicted RBP19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 ATP2A3Q93084 1043 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 PCED1BQ96HM7 432 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 MMS19Q96T76 1030 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 ARHGAP26Q9UNA1 814 aa19.13■□□□□ 0.65
PRPF40B-215ENST00000551418 K7EQS6 105 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 LEFTY2O00292 366 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 CLIC2O15247 247 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms