RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 BECN1Q14457 450 aa21.68■■□□□ 1.06
SLC48A1-208ENST00000551301 ZNF268Q14587 947 aaPredicted RBP21.68■■□□□ 1.06
SLC48A1-208ENST00000551301 TTC8Q8TAM2 541 aa21.68■■□□□ 1.06
SLC48A1-208ENST00000551301 MYCBPAPQ8TBZ2 947 aa21.68■■□□□ 1.06
SLC48A1-208ENST00000551301 SPATA17Q96L03 361 aa21.68■■□□□ 1.06
SLC48A1-208ENST00000551301 LRRC3BQ96PB8 259 aa21.68■■□□□ 1.06
SLC48A1-208ENST00000551301 PRMT8Q9NR22 394 aaPredicted RBP21.68■■□□□ 1.06
SLC48A1-208ENST00000551301 GKN1Q9NS71 199 aa21.68■■□□□ 1.06
SLC48A1-208ENST00000551301 PATJQ8NI35 1801 aa21.68■■□□□ 1.06
SLC48A1-208ENST00000551301 MYO15AQ9UKN7 3530 aa21.68■■□□□ 1.06
SLC48A1-208ENST00000551301 SHISA7A6NL88 538 aa21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 A8MXQ7 604 aa21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 HCRTO43612 131 aa21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 CKMP06732 381 aa21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 BDNFP23560 247 aa21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 CXCL12P48061 93 aa21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 SOX9P48436 509 aa21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 MYL6P60660 151 aa21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 KCNB1Q14721 858 aa21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 ZNF699Q32M78 642 aa21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 MDH1BQ5I0G3 518 aa21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 ZNF687Q8N1G0 1237 aa21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 RUBCNQ92622 972 aa21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 USP13Q92995 863 aaPredicted RBP21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 SECISBP2LQ93073 1101 aaKnown RBP21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 CRTAC1Q9NQ79 661 aa21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 HPSEQ9Y251 543 aa21.67■■□□□ 1.06
SLC48A1-208ENST00000551301 ATP8B3O60423 1300 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 A0A1W2PQ27 194 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 A0A1W2PQ64 194 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 A0A1W2PQD8 194 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 NR3C1P04150 777 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 CHRNB1P11230 501 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 PTPN1P18031 435 aaKnown RBP21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 TRIM21P19474 475 aaKnown RBP21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 PPP3CCP48454 512 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 NDUFA8P51970 172 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 PDGFRLQ15198 375 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 ZNF667Q5HYK9 610 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 DENND5BQ6ZUT9 1274 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 SYNPOQ8N3V7 929 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 SPEM1Q8N4L4 309 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 KIAA0895Q8NCT3 520 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 STKLD1Q8NE28 680 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 PARD3BQ8TEW8 1205 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 TMEM174Q8WUU8 243 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 PCED1BQ96HM7 432 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 MRPL45Q9BRJ2 306 aaKnown RBP21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 ELOVL4Q9GZR5 314 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 TRPM5Q9NZQ8 1165 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 ZDHHC9Q9Y397 364 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 COL4A2P08572 1712 aa21.66■■□□□ 1.06
SLC48A1-208ENST00000551301 DENND4CQ5VZ89 1909 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 FAM160A1Q05DH4 1040 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 TNK2Q07912 1038 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 RUNX3Q13761 415 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 NCOA4Q13772 614 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 CCDC142Q17RM4 750 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 CEP135Q66GS9 1140 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 TTC16Q8NEE8 873 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 ZNF516Q92618 1163 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 TNIP3Q96KP6 325 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 FAM83CQ9BQN1 747 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 KCTD10Q9H3F6 313 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 DMAC2Q9NW81 257 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 CCL26Q9Y258 94 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 CFAP54Q96N23 3096 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 FANCMQ8IYD8 2048 aa21.65■■□□□ 1.06
SLC48A1-208ENST00000551301 FAM237AA0A1B0GTK4 181 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 GOLGA6L4A6NEF3 574 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 PFKLP17858 780 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 HDCP19113 662 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 RPL13P26373 211 aaKnown RBP21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 CASP4P49662 377 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 CLDN10P78369 228 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 PON2Q15165 354 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 TSSK4Q6SA08 328 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 CPA6Q8N4T0 437 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 ZBTB44Q8NCP5 570 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 B3GALNT2Q8NCR0 500 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 TMC2Q8TDI7 906 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 C8orf48Q96LL4 319 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 VRTNQ9H8Y1 702 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 NCDNQ9UBB6 729 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 RAB23Q9ULC3 237 aa21.64■■□□□ 1.05
SLC48A1-208ENST00000551301 LRRIQ3A6PVS8 624 aaPredicted RBP21.63■■□□□ 1.05
SLC48A1-208ENST00000551301 IKBKBO14920 756 aa21.63■■□□□ 1.05
SLC48A1-208ENST00000551301 RHOBTB3O94955 611 aa21.63■■□□□ 1.05
SLC48A1-208ENST00000551301 GRSF1Q12849 480 aaKnown RBP eCLIP21.63■■□□□ 1.05
SLC48A1-208ENST00000551301 MTF1Q14872 753 aa21.63■■□□□ 1.05
SLC48A1-208ENST00000551301 SGSM1Q2NKQ1 1148 aa21.63■■□□□ 1.05
SLC48A1-208ENST00000551301 TDRD10Q5VZ19 366 aaKnown RBP21.63■■□□□ 1.05
SLC48A1-208ENST00000551301 KRBA2Q6ZNG9 492 aa21.63■■□□□ 1.05
SLC48A1-208ENST00000551301 TAF4BQ92750 862 aa21.63■■□□□ 1.05
SLC48A1-208ENST00000551301 SLITRK1Q96PX8 696 aa21.63■■□□□ 1.05
SLC48A1-208ENST00000551301 DNAI2Q9GZS0 605 aa21.63■■□□□ 1.05
SLC48A1-208ENST00000551301 XYLT2Q9H1B5 865 aa21.63■■□□□ 1.05
SLC48A1-208ENST00000551301 EBF3Q9H4W6 596 aa21.63■■□□□ 1.05
SLC48A1-208ENST00000551301 OTOGLQ3ZCN5 2332 aa21.63■■□□□ 1.05
SLC48A1-208ENST00000551301 F8VP50 259 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms