RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 PRSS33Q8NF86 280 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 ELSPBP1Q96BH3 223 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 C8orf48Q96LL4 319 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 ZNF518BQ9C0D4 1074 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 DNAI2Q9GZS0 605 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 SLITRK6Q9H5Y7 841 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 TRPV4Q9HBA0 871 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 SLC2A4RGQ9NR83 387 aa16.41■□□□□ 0.22
PRPF40B-211ENST00000551063 SLC38A8A6NNN8 435 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 SOBPA7XYQ1 873 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 NARSO43776 548 aaKnown RBP16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 LRRN2O75325 713 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 CILPO75339 1184 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 FCARP24071 287 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 DDX6P26196 483 aaKnown RBP eCLIP16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 GRIK1P39086 918 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 NLRP12P59046 1061 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 CETN1Q12798 172 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 DPCR1Q3MIW9 517 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 CT47A1Q5JQC4 288 aaPredicted RBP16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 FAM78AQ5JUQ0 283 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 FAM35AQ86V20 835 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 ZSCAN18Q8TBC5 510 aaPredicted RBP16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 GPR152Q8TDT2 470 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 E2F7Q96AV8 911 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 KXD1Q9BQD3 176 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 RPP25Q9BUL9 199 aaKnown RBP16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 NT5C1AQ9BXI3 368 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 B3GNT5Q9BYG0 378 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 TASP1Q9H6P5 420 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 ZFP14Q9HCL3 533 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 EHD2Q9NZN4 543 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 HMGXB4Q9UGU5 601 aa16.4■□□□□ 0.22
PRPF40B-211ENST00000551063 F8VP50 259 aa16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 F11P03951 625 aa16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 ERCC5P28715 1186 aaPredicted RBP16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 WEE1P30291 646 aa16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 CYP4F8P98187 520 aa16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 GPR158Q5T848 1215 aa16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 DENND5BQ6ZUT9 1274 aa16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 ACOT1Q86TX2 421 aa16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 DEPDC1BQ8WUY9 529 aa16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 SMARCD1Q96GM5 515 aa16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 ZSWIM3Q96MP5 696 aa16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 MED15Q96RN5 788 aa16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 TWNKQ96RR1 684 aa16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 TTLL2Q9BWV7 592 aa16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 WNT16Q9UBV4 365 aa16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 MAGED2Q9UNF1 606 aaPredicted RBP16.39■□□□□ 0.21
PRPF40B-211ENST00000551063 AFPP02771 609 aaKnown RBP16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 CD58P19256 250 aa16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 STXBP5Q5T5C0 1151 aa16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 TANGO2Q6ICL3 276 aa16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 TMEM150AQ86TG1 271 aa16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 FUKQ8N0W3 1084 aa16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 STKLD1Q8NE28 680 aa16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 ST13P5Q8NFI4 369 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 WHAMMQ8TF30 809 aa16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 MRPS31Q92665 395 aaKnown RBP16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 CNOT6LQ96LI5 555 aaKnown RBP16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 MED10Q9BTT4 135 aa16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 DMAP1Q9NPF5 467 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 FBXL21Q9UKT6 434 aa16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 MYO10Q9HD67 2058 aa16.38■□□□□ 0.21
PRPF40B-211ENST00000551063 CLDN5O00501 218 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 TADA3O75528 432 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 TBXAS1P24557 533 aaPredicted RBP16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 CACNA2D1P54289 1103 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 VCPP55072 806 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 YWHAEP62258 255 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 PFKPQ01813 784 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 KCNH2Q12809 1159 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 TCF15Q12870 199 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 ORC1Q13415 861 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 CUL2Q13617 745 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 TPD52L1Q16890 204 aaPredicted RBP16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 PAQR9Q6ZVX9 377 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 SLC2A14Q8TDB8 520 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 NT5C1BQ96P26 610 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 ARID3AQ99856 593 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 KRT82Q9NSB4 513 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 CISHQ9NSE2 258 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 TMEM30AQ9NV96 361 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 OBP2AQ9NY56 170 aa16.37■□□□□ 0.21
PRPF40B-211ENST00000551063 TRIOO75962 3097 aa16.36■□□□□ 0.21
PRPF40B-211ENST00000551063 CFHP08603 1231 aa16.36■□□□□ 0.21
PRPF40B-211ENST00000551063 CCDC130P13994 396 aa16.36■□□□□ 0.21
PRPF40B-211ENST00000551063 CCDC183Q5T5S1 534 aa16.36■□□□□ 0.21
PRPF40B-211ENST00000551063 MON1AQ86VX9 555 aa16.36■□□□□ 0.21
PRPF40B-211ENST00000551063 ARID3BQ8IVW6 561 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-211ENST00000551063 FAM114A1Q8IWE2 563 aa16.36■□□□□ 0.21
PRPF40B-211ENST00000551063 DNASE1L2Q92874 299 aa16.36■□□□□ 0.21
PRPF40B-211ENST00000551063 TATDN2Q93075 761 aa16.36■□□□□ 0.21
PRPF40B-211ENST00000551063 HNRNPABQ99729 332 aaKnown RBP16.36■□□□□ 0.21
PRPF40B-211ENST00000551063 THAP9Q9H5L6 903 aa16.36■□□□□ 0.21
PRPF40B-211ENST00000551063 ARHGEF3Q9NR81 526 aa16.36■□□□□ 0.21
PRPF40B-211ENST00000551063 FAM49BQ9NUQ9 324 aa16.36■□□□□ 0.21
PRPF40B-211ENST00000551063 ZDBF2Q9HCK1 2354 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms