RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 CD58P19256 250 aa12.86□□□□□ -0.35
ERBB3-216ENST00000550869 FGFR3P22607 806 aa12.86□□□□□ -0.35
ERBB3-216ENST00000550869 SP100P23497 879 aaPredicted RBP12.86□□□□□ -0.35
ERBB3-216ENST00000550869 GNL1P36915 607 aaPredicted RBP12.86□□□□□ -0.35
ERBB3-216ENST00000550869 LHX1P48742 406 aa12.86□□□□□ -0.35
ERBB3-216ENST00000550869 NDST1P52848 882 aa12.86□□□□□ -0.35
ERBB3-216ENST00000550869 VCPP55072 806 aaKnown RBP12.86□□□□□ -0.35
ERBB3-216ENST00000550869 RAD9BQ6WBX8 426 aa12.86□□□□□ -0.35
ERBB3-216ENST00000550869 DSTYKQ6XUX3 929 aa12.86□□□□□ -0.35
ERBB3-216ENST00000550869 NOP9Q86U38 636 aaKnown RBP12.86□□□□□ -0.35
ERBB3-216ENST00000550869 ZNF677Q86XU0 584 aa12.86□□□□□ -0.35
ERBB3-216ENST00000550869 ADGRF2Q8IZF7 708 aa12.86□□□□□ -0.35
ERBB3-216ENST00000550869 BCL7CQ8WUZ0 217 aaPredicted RBP12.86□□□□□ -0.35
ERBB3-216ENST00000550869 ZNF606Q8WXB4 792 aa12.86□□□□□ -0.35
ERBB3-216ENST00000550869 ACSF2Q96CM8 615 aaPredicted RBP12.86□□□□□ -0.35
ERBB3-216ENST00000550869 TMEM176AQ96HP8 235 aa12.86□□□□□ -0.35
ERBB3-216ENST00000550869 RTP3Q9BQQ7 232 aa12.86□□□□□ -0.35
ERBB3-216ENST00000550869 NT5C1AQ9BXI3 368 aa12.86□□□□□ -0.35
ERBB3-216ENST00000550869 GPR62Q9BZJ7 368 aa12.86□□□□□ -0.35
ERBB3-216ENST00000550869 ACP6Q9NPH0 428 aa12.86□□□□□ -0.35
ERBB3-216ENST00000550869 HMGXB4Q9UGU5 601 aa12.86□□□□□ -0.35
ERBB3-216ENST00000550869 PRG3Q9Y2Y8 225 aaPredicted RBP12.86□□□□□ -0.35
ERBB3-216ENST00000550869 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.86□□□□□ -0.35
ERBB3-216ENST00000550869 C2orf16Q68DN1 1984 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 SOWAHDA6NJG2 315 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 DDX3XO00571 662 aaKnown RBP eCLIP12.85□□□□□ -0.357e-7■■■■□ 26.2
ERBB3-216ENST00000550869 GALR2O43603 387 aaPredicted RBP12.85□□□□□ -0.35
ERBB3-216ENST00000550869 TRAPPC3O43617 180 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 TBC1D4O60343 1298 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 TADA2AO75478 443 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 ODC1P11926 461 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 LMO2P25791 158 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 EIF4A3P38919 411 aaKnown RBP12.85□□□□□ -0.35
ERBB3-216ENST00000550869 USP8P40818 1118 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 FMO1Q01740 532 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 CDR2Q01850 454 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 ARID5AQ03989 594 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 ELAVL2Q12926 359 aaKnown RBP12.85□□□□□ -0.35
ERBB3-216ENST00000550869 KIAA0319Q5VV43 1072 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 OTOP3Q7RTS5 596 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 GPR149Q86SP6 731 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 OR6B3Q8NGW1 331 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 HASPINQ8TF76 798 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 AUTS2Q8WXX7 1259 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 TFAP2BQ92481 460 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 AGPAT1Q99943 283 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 VN1R3Q9BXE9 311 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 RHOBTB2Q9BYZ6 727 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 MRPL17Q9NRX2 175 aaKnown RBP12.85□□□□□ -0.35
ERBB3-216ENST00000550869 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.85□□□□□ -0.35
ERBB3-216ENST00000550869 CDH22Q9UJ99 828 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 PCDHGC3Q9UN70 934 aa12.85□□□□□ -0.35
ERBB3-216ENST00000550869 EPN1Q9Y6I3 576 aaPredicted RBP12.85□□□□□ -0.35
ERBB3-216ENST00000550869 SPDYE4A6NLX3 237 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 EIF3CLB5ME19 914 aaKnown RBP12.84□□□□□ -0.35
ERBB3-216ENST00000550869 I3L4J1 428 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 ZNF263O14978 683 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 C1RP00736 705 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 SOD2P04179 222 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 VDRP11473 427 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 KLRC2P26717 231 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 GNA15P30679 374 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 CLCN4P51793 760 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 MTF1Q14872 753 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 SLC18A3Q16572 532 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 ZNF394Q53GI3 561 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 ARHGAP17Q68EM7 881 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 FUT10Q6P4F1 479 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 FAM171BQ6P995 826 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 CCDC149Q6ZUS6 474 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 GPR65Q8IYL9 337 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 C12orf76Q8N812 135 aaPredicted RBP12.84□□□□□ -0.35
ERBB3-216ENST00000550869 LNX1Q8TBB1 728 aaPredicted RBP12.84□□□□□ -0.35
ERBB3-216ENST00000550869 SLC20A1Q8WUM9 679 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 ATOH1Q92858 354 aaPredicted RBP12.84□□□□□ -0.35
ERBB3-216ENST00000550869 CCDC42Q96M95 316 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 PCDHB18PQ96TA0 734 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 PHOX2BQ99453 314 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 EIF3CQ99613 913 aaKnown RBP12.84□□□□□ -0.35
ERBB3-216ENST00000550869 PKMYT1Q99640 499 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 ACBD6Q9BR61 282 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 CHST7Q9NS84 486 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 KCND1Q9NSA2 647 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 DDX43Q9NXZ2 648 aaKnown RBP12.84□□□□□ -0.35
ERBB3-216ENST00000550869 ADAMTS1Q9UHI8 967 aa12.84□□□□□ -0.35
ERBB3-216ENST00000550869 SF3B1O75533 1304 aaKnown RBP eCLIP12.84□□□□□ -0.35
ERBB3-216ENST00000550869 A0A087X0T9 212 aa12.83□□□□□ -0.36
ERBB3-216ENST00000550869 A8MXQ7 604 aa12.83□□□□□ -0.36
ERBB3-216ENST00000550869 HCRTO43612 131 aa12.83□□□□□ -0.36
ERBB3-216ENST00000550869 NRDCO43847 1150 aa12.83□□□□□ -0.36
ERBB3-216ENST00000550869 LILRB3O75022 631 aa12.83□□□□□ -0.36
ERBB3-216ENST00000550869 NDUFA10O95299 355 aa12.83□□□□□ -0.36
ERBB3-216ENST00000550869 CALCAP01258 141 aa12.83□□□□□ -0.36
ERBB3-216ENST00000550869 CYP1A1P04798 512 aaPredicted RBP12.83□□□□□ -0.36
ERBB3-216ENST00000550869 URODP06132 367 aa12.83□□□□□ -0.36
ERBB3-216ENST00000550869 ADH1AP07327 375 aa12.83□□□□□ -0.36
ERBB3-216ENST00000550869 MMEP08473 750 aa12.83□□□□□ -0.36
ERBB3-216ENST00000550869 CNPP09543 421 aaKnown RBP12.83□□□□□ -0.36
ERBB3-216ENST00000550869 FAM228BP0C875 321 aa12.83□□□□□ -0.36
ERBB3-216ENST00000550869 GZMAP12544 262 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms