RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 NIPA2Q8N8Q9 360 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 SLC35B2Q8TB61 432 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 MAML1Q92585 1016 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 HSPH1Q92598 858 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 TMEM176AQ96HP8 235 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 PARK7Q99497 189 aaKnown RBP14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 KATNBL1Q9H079 304 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 LHX5Q9H2C1 402 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 PDZD7Q9H5P4 517 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 AGAP1Q9UPQ3 857 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 GINS2Q9Y248 185 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 DRG1Q9Y295 367 aaKnown RBP14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 RASA4BC9J798 803 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 HGSO14964 777 aaPredicted RBP14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 RASA4O43374 803 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 CILPO75339 1184 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 SNAI1O95863 264 aaPredicted RBP14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 CYP3A5P20815 502 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 MIPP30301 263 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 ADCYAP1R1P41586 468 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 GPD2P43304 727 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 HUNKP57058 714 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 LMNB2Q03252 620 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 PPP1R2P3Q6NXS1 205 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 UNC45BQ8IWX7 931 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 CNPY4Q8N129 248 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 BBOF1Q8ND07 529 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 LRRN4Q8WUT4 740 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 ABCF3Q9NUQ8 709 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 HAUS2Q9NVX0 235 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 EURLQ9NYK6 297 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 PPME1Q9Y570 386 aa14.9□□□□□ -0.02
CALCOCO1-218ENST00000550804 EXOC1LA0A1B0GW35 172 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 M0QYV0 167 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 SNX3O60493 162 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 CDH16O75309 829 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 TMEM62Q0P6H9 643 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 MYO1EQ12965 1108 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 PDIA2Q13087 525 aaKnown RBP14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 GRB14Q14449 540 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 FAM110CQ1W6H9 321 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 FAM133BQ5BKY9 247 aaKnown RBP14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 FNBP1LQ5T0N5 605 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 TRNP1Q6NT89 227 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 ZNF467Q7Z7K2 595 aaPredicted RBP14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 RELL1Q8IUW5 271 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 KCTD6Q8NC69 237 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 NKD2Q969F2 451 aaPredicted RBP14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 HPDLQ96IR7 371 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 PAIP2Q9BPZ3 127 aaKnown RBP14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 VPS37BQ9H9H4 285 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 VTA1Q9NP79 307 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 SAMD15Q9P1V8 674 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 PLXNB2O15031 1838 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 PLXNA1Q9UIW2 1896 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 RBM47A0AV96 593 aaKnown RBP14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 ITGAVP06756 1048 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 COPS2P61201 443 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 STAT4Q14765 748 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 PKN2Q16513 984 aaKnown RBP14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 C15orf59Q2T9L4 293 aaPredicted RBP14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 NPNTQ6UXI9 565 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 DPP9Q86TI2 863 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 EXOC8Q8IYI6 725 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 FAM71DQ8N9W8 422 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 LPIN3Q9BQK8 851 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 CALN1Q9BXU9 219 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 SLC40A1Q9NP59 571 aa14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 DDX56Q9NY93 547 aaKnown RBP14.89□□□□□ -0.03
CALCOCO1-218ENST00000550804 SSTR1P30872 391 aa14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 FOXN2P32314 431 aa14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 CTCFP49711 727 aaPredicted RBP14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 SLC26A2P50443 739 aa14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 NDST1P52848 882 aa14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 WDR4P57081 412 aaKnown RBP14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 GPX6P59796 221 aa14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 TAP1Q03518 808 aa14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 LAMC2Q13753 1193 aa14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 CCDC142Q17RM4 750 aa14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 NLRP7Q8WX94 980 aa14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 PRCCQ92733 491 aaPredicted RBP14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 THOC1Q96FV9 657 aaKnown RBP14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 PEBP4Q96S96 227 aa14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 PRMT7Q9NVM4 692 aaPredicted RBP14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 LGALS13Q9UHV8 139 aa14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 STRIP2Q9ULQ0 834 aa14.88□□□□□ -0.03
CALCOCO1-218ENST00000550804 A0A1W2PPM1 405 aa14.87□□□□□ -0.03
CALCOCO1-218ENST00000550804 ALOX15BO15296 676 aa14.87□□□□□ -0.03
CALCOCO1-218ENST00000550804 MED7O43513 233 aa14.87□□□□□ -0.03
CALCOCO1-218ENST00000550804 RASSF9O75901 435 aa14.87□□□□□ -0.03
CALCOCO1-218ENST00000550804 IL18RAPO95256 599 aa14.87□□□□□ -0.03
CALCOCO1-218ENST00000550804 MAP3K6O95382 1288 aa14.87□□□□□ -0.03
CALCOCO1-218ENST00000550804 RPL22P35268 128 aaKnown RBP14.87□□□□□ -0.03
CALCOCO1-218ENST00000550804 PHKA2P46019 1235 aa14.87□□□□□ -0.03
CALCOCO1-218ENST00000550804 RGS7P49802 495 aa14.87□□□□□ -0.03
CALCOCO1-218ENST00000550804 EFTUD2Q15029 972 aaKnown RBP eCLIP14.87□□□□□ -0.031e-7■■■□□ 18.3
CALCOCO1-218ENST00000550804 CDO1Q16878 200 aa14.87□□□□□ -0.03
CALCOCO1-218ENST00000550804 FAM102AQ5T9C2 384 aaPredicted RBP14.87□□□□□ -0.03
CALCOCO1-218ENST00000550804 PLEKHH3Q7Z736 793 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms