RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 FAAP100Q0VG06 881 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 ELAVL2Q12926 359 aaKnown RBP13.25□□□□□ -0.29
CACNB3-217ENST00000550483 BRD3Q15059 726 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 HADHQ16836 314 aaKnown RBP13.25□□□□□ -0.29
CACNB3-217ENST00000550483 WSCD1Q658N2 575 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 GPR153Q6NV75 609 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.25□□□□□ -0.29
CACNB3-217ENST00000550483 KCTD13Q8WZ19 329 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 RBM41Q96IZ5 413 aaKnown RBP13.25□□□□□ -0.29
CACNB3-217ENST00000550483 RNPC3Q96LT9 517 aaKnown RBP13.25□□□□□ -0.29
CACNB3-217ENST00000550483 MCEEQ96PE7 176 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 CPXM1Q96SM3 734 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 PSMB7Q99436 277 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 SYT15Q9BQS2 421 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 OSBPL7Q9BZF2 842 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 SLITRK6Q9H5Y7 841 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 C11orf49Q9H6J7 331 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 TMEM59LQ9UK28 342 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 TBX21Q9UL17 535 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 MTUS1Q9ULD2 1270 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 PACSIN2Q9UNF0 486 aaPredicted RBP13.25□□□□□ -0.29
CACNB3-217ENST00000550483 ALPK3Q96L96 1907 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 TANC1Q9C0D5 1861 aa13.25□□□□□ -0.29
CACNB3-217ENST00000550483 PDE2AO00408 941 aaPredicted RBP13.24□□□□□ -0.29
CACNB3-217ENST00000550483 DPYSL4O14531 572 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 SYN3O14994 580 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 KRT7P08729 469 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 CLTBP09497 229 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 MAGEA10P43363 369 aaPredicted RBP13.24□□□□□ -0.29
CACNB3-217ENST00000550483 DNA2P51530 1060 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 COPS2P61201 443 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 TLE2Q04725 743 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 ORC1Q13415 861 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 TRIM60Q495X7 471 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 MAP9Q49MG5 647 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 CLLU1OSQ5K130 101 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 WDR93Q6P2C0 686 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 CNKSR3Q6P9H4 555 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 COLGALT2Q8IYK4 626 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 KATNAL2Q8IYT4 538 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 EXD1Q8NHP7 514 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 COLEC11Q9BWP8 271 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 DUSP16Q9BY84 665 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 GOLPH3Q9H4A6 298 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 PNPLA8Q9NP80 782 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 ST7Q9NRC1 585 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 HOMER3Q9NSC5 361 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 FAM49BQ9NUQ9 324 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 TBC1D13Q9NVG8 400 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 TMEM51Q9NW97 253 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.24□□□□□ -0.29
CACNB3-217ENST00000550483 ASNSD1Q9NWL6 643 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 RAB21Q9UL25 225 aa13.24□□□□□ -0.29
CACNB3-217ENST00000550483 CCDC151A5D8V7 595 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 KRIT1O00522 736 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 RNF8O76064 485 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 FBXO21O94952 628 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 GLI1P08151 1106 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 PDGFRBP09619 1106 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 FAM200BP0CF97 657 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 NPR3P17342 541 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 PSMA2P25787 234 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 PCK1P35558 622 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 TSPY1Q01534 308 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 SLC6A3Q01959 620 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 PDE4CQ08493 712 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 IKBKEQ14164 716 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 LONRF2Q1L5Z9 754 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 LRIT3Q3SXY7 679 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 TIGD5Q53EQ6 642 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 ODF2Q5BJF6 829 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 FAM102AQ5T9C2 384 aaPredicted RBP13.23□□□□□ -0.29
CACNB3-217ENST00000550483 C8orf74Q6P047 294 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 MAATS1Q7Z4T9 603 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 NECAB2Q7Z6G3 386 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 OSTM1Q86WC4 334 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 TTC30AQ86WT1 665 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 LRRC43Q8N309 656 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 C12orf29Q8N999 325 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 CCDC26Q8TAB7 109 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 UBA3Q8TBC4 463 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 MYCBPAPQ8TBZ2 947 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 SLC2A14Q8TDB8 520 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.23□□□□□ -0.29
CACNB3-217ENST00000550483 SMARCD1Q96GM5 515 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 CNPY3Q9BT09 278 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 TRIM62Q9BVG3 475 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 CYTH4Q9UIA0 394 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 NME7Q9Y5B8 376 aa13.23□□□□□ -0.29
CACNB3-217ENST00000550483 SCN1AP35498 2009 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 ABHD14A-ACY1A0A1B0GW23 586 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 E5RJQ4 531 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 GOLGA8SH3BPF8 625 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 FGGP02679 453 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 H2AFXP16104 143 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-217ENST00000550483 GPD1P21695 349 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 LMO2P25791 158 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 SSTR3P32745 418 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-217ENST00000550483 PTPN7P35236 360 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 AFF1P51825 1210 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms