RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 LDHDQ86WU2 507 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 CCDC103Q8IW40 242 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 WDR60Q8WVS4 1066 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 WNK4Q96J92 1243 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 TMEM121Q9BTD3 319 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 APOA4P06727 396 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 TFE3P19532 575 aaPredicted RBP16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 CDK16Q00536 496 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 FAM81AQ8TBF8 368 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 ATP8B3O60423 1300 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 DLGAP3O95886 979 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 ADORA2BP29275 332 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 RIPK1Q13546 671 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 ACCSLQ4AC99 568 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 DCLK3Q9C098 648 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 SARS2Q9NP81 518 aaKnown RBP16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 SLC39A10Q9ULF5 831 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 UBA6A0AVT1 1052 aaPredicted RBP16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 HNRNPRO43390 633 aaKnown RBP16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 TBC1D12O60347 775 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 HLA-DPA1P20036 260 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 EFNA5P52803 228 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 RRP1BQ14684 758 aaKnown RBP16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 INTS5Q6P9B9 1019 aaKnown RBP16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 DSTYKQ6XUX3 929 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 B3GNT6Q6ZMB0 384 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 FAM193BQ96PV7 902 aaPredicted RBP16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 TMEM79Q9BSE2 394 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 DMAP1Q9NPF5 467 aaPredicted RBP16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 NSMCE4AQ9NXX6 385 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 TEKT2Q9UIF3 430 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 SLC13A4Q9UKG4 626 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 LIN7AO14910 233 aaPredicted RBP16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 NUDT17P0C025 328 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 PDPK2PQ6A1A2 396 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 PATL1Q86TB9 770 aaKnown RBP16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 C2orf69Q8N8R5 385 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 PPHLN1Q8NEY8 458 aaKnown RBP16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 TSPAN17Q96FV3 270 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 VPS50Q96JG6 964 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 TDRD3Q9H7E2 651 aaKnown RBP16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 RNF146Q9NTX7 359 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 COMMD3-BMI1R4GMX3 469 aa16.41■□□□□ 0.22
RBFOX1-212ENST00000550418 E9PBE3 544 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 KLHL41O60662 606 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 RALBP11234 206 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 RGS7P49802 495 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 NCALDP61601 193 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 ATP1A4Q13733 1029 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 PTK2BQ14289 1009 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 QPCTQ16769 361 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 KCTD21Q4G0X4 260 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 FAM8A1Q9UBU6 413 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 REXO2Q9Y3B8 237 aaKnown RBP16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 SPATA31A5Q5VU36 1347 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 SPATA31A7Q8IWB4 1347 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 TYW5A2RUC4 315 aaKnown RBP16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 IQCA1LA6NCM1 817 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 RAG1P15918 1043 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 RUNX1T1Q06455 604 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 BEST2Q8NFU1 509 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 DCUN1D5Q9BTE7 237 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 HACD3Q9P035 362 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 V9GYQ6 96 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 ADRA1DP25100 572 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 SF3B3Q15393 1217 aaKnown RBP16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 RMND5BQ96G75 393 aaPredicted RBP16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 ELMO2Q96JJ3 720 aa16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 OLA1Q9NTK5 396 aaKnown RBP16.4■□□□□ 0.22
RBFOX1-212ENST00000550418 E5RI56 91 aa16.39■□□□□ 0.22
RBFOX1-212ENST00000550418 DNALI1O14645 258 aaPredicted RBP16.39■□□□□ 0.22
RBFOX1-212ENST00000550418 GRAP2O75791 330 aa16.39■□□□□ 0.22
RBFOX1-212ENST00000550418 KYQ8NBH2 561 aa16.39■□□□□ 0.22
RBFOX1-212ENST00000550418 ARHGEF38Q9NXL2 777 aa16.39■□□□□ 0.22
RBFOX1-212ENST00000550418 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.39■□□□□ 0.22
RBFOX1-212ENST00000550418 ADGRB2O60241 1585 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 STILQ15468 1287 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 RBBP7Q16576 425 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 ZC3H12BQ5HYM0 836 aaKnown RBP16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 MARK2Q7KZI7 788 aaKnown RBP16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 CCDC60Q8IWA6 550 aaPredicted RBP16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 CTNNAL1Q9UBT7 734 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 TMEM247A6NEH6 219 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 KLRK1P26718 216 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 EIF2B2P49770 351 aaKnown RBP16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 LBRQ14739 615 aaKnown RBP16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 GSTA3Q16772 222 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 TCHHL1Q5QJ38 904 aaPredicted RBP16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 SEL1L3Q68CR1 1132 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 EGFL8Q99944 293 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 GORASP1Q9BQQ3 440 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 PCDH9Q9HC56 1237 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 RPL26L1Q9UNX3 145 aaKnown RBP16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 PCDHA3Q9Y5H8 950 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 FER1L4A9Z1Z3 1794 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 F8W8V4 182 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 ABLIM1O14639 778 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 NDUFB10O96000 172 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms