RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 FAM126AQ9BYI3 521 aaPredicted RBP14.36□□□□□ -0.11
NUP188-211ENST00000550219 TRPC7Q9HCX4 862 aa14.36□□□□□ -0.11
NUP188-211ENST00000550219 THG1LQ9NWX6 298 aaKnown RBP14.36□□□□□ -0.11
NUP188-211ENST00000550219 MAPK8IP1Q9UQF2 711 aa14.36□□□□□ -0.11
NUP188-211ENST00000550219 CCL26Q9Y258 94 aa14.36□□□□□ -0.11
NUP188-211ENST00000550219 PTPRJQ12913 1337 aa14.36□□□□□ -0.11
NUP188-211ENST00000550219 PTPRZ1P23471 2315 aaPredicted RBP14.35□□□□□ -0.11
NUP188-211ENST00000550219 CHURC1-FNTBB4DL54 471 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 TGFB1I1O43294 461 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 TNNC2P02585 160 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 CSH1P0DML2 217 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 CSH2P0DML3 217 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 HMGA1P17096 107 aaKnown RBP14.35□□□□□ -0.11
NUP188-211ENST00000550219 CYP2F1P24903 491 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 ERCC5P28715 1186 aaPredicted RBP14.35□□□□□ -0.11
NUP188-211ENST00000550219 FNTBP49356 437 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 NRLP54845 237 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 PSMC1P62191 440 aaKnown RBP14.35□□□□□ -0.11
NUP188-211ENST00000550219 SNRPFP62306 86 aaKnown RBP14.35□□□□□ -0.11
NUP188-211ENST00000550219 RBP5P82980 135 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 PLCB2Q00722 1185 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 DMWDQ09019 674 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 STIM1Q13586 685 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 ZCWPW2Q504Y3 356 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 TXNDC8Q6A555 127 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 TRIM68Q6AZZ1 485 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 LRSAM1Q6UWE0 723 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 TMEM150AQ86TG1 271 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 CBWD2Q8IUF1 395 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 SCN4BQ8IWT1 228 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 TMEM86AQ8N2M4 240 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 CELF5Q8N6W0 485 aaKnown RBP14.35□□□□□ -0.11
NUP188-211ENST00000550219 OR5B17Q8NGF7 314 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 MED15Q96RN5 788 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 DACH1Q9UI36 760 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 SIX4Q9UIU6 781 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 GTF3C4Q9UKN8 822 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 TRAF3IP3Q9Y228 551 aa14.35□□□□□ -0.11
NUP188-211ENST00000550219 GVINP1Q7Z2Y8 2422 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 RIF1Q5UIP0 2472 aaKnown RBP14.34□□□□□ -0.11
NUP188-211ENST00000550219 KIF26AQ9ULI4 1882 aaPredicted RBP14.34□□□□□ -0.11
NUP188-211ENST00000550219 PDXKO00764 312 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 PSMA7O14818 248 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 TADA3O75528 432 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 F11P03951 625 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 MLLT6P55198 1093 aaPredicted RBP14.34□□□□□ -0.11
NUP188-211ENST00000550219 RPL10AP62906 217 aaKnown RBP14.34□□□□□ -0.11
NUP188-211ENST00000550219 MYO1EQ12965 1108 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 SRSF5Q13243 272 aaKnown RBP14.34□□□□□ -0.11
NUP188-211ENST00000550219 NFIL3Q16649 462 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 RSPO4Q2I0M5 234 aaPredicted RBP14.34□□□□□ -0.11
NUP188-211ENST00000550219 ITPRIPL2Q3MIP1 535 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 DGKKQ5KSL6 1271 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 C11orf57Q6ZUT1 292 aaPredicted RBP14.34□□□□□ -0.11
NUP188-211ENST00000550219 NELFCDQ8IXH7 590 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 SPEM1Q8N4L4 309 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 TOP6BLQ8N6T0 577 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 CXorf38Q8TB03 319 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 USP13Q92995 863 aaPredicted RBP14.34□□□□□ -0.11
NUP188-211ENST00000550219 SYT15Q9BQS2 421 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 ACBD6Q9BR61 282 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 EBF3Q9H4W6 596 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 GKN1Q9NS71 199 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 INTS13Q9NVM9 706 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 HSPBP1Q9NZL4 362 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 CGNQ9P2M7 1197 aaKnown RBP14.34□□□□□ -0.11
NUP188-211ENST00000550219 RWDD2AQ9UIY3 292 aa14.34□□□□□ -0.11
NUP188-211ENST00000550219 OBSL1O75147 1896 aa14.33□□□□□ -0.11
NUP188-211ENST00000550219 ZNF233A6NK53 670 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 KIAA0391O15091 583 aaKnown RBP14.33□□□□□ -0.12
NUP188-211ENST00000550219 CLSTN1O94985 981 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 CAVIN2O95810 425 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 ARSAP15289 507 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 DDX6P26196 483 aaKnown RBP eCLIP14.33□□□□□ -0.12
NUP188-211ENST00000550219 PCSK1P29120 753 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 WEE1P30291 646 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 HOXC13P31276 330 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 CYP2J2P51589 502 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 PMS1P54277 932 aaKnown RBP14.33□□□□□ -0.12
NUP188-211ENST00000550219 PAK1Q13153 545 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 PUM1Q14671 1186 aaKnown RBP eCLIP14.33□□□□□ -0.12
NUP188-211ENST00000550219 SOWAHAQ2M3V2 549 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 ANO6Q4KMQ2 910 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 TTI2Q6NXR4 508 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 CC2D1AQ6P1N0 951 aaPredicted RBP14.33□□□□□ -0.12
NUP188-211ENST00000550219 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.33□□□□□ -0.12
NUP188-211ENST00000550219 C12orf56Q8IXR9 622 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 ZC3H3Q8IXZ2 948 aaKnown RBP14.33□□□□□ -0.12
NUP188-211ENST00000550219 RDH13Q8NBN7 331 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 RIN3Q8TB24 985 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 GOLGA5Q8TBA6 731 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 NELFBQ8WX92 580 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 MYLPFQ96A32 169 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 HPDLQ96IR7 371 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 BPIFA3Q9BQP9 254 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 KIF9Q9HAQ2 790 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 ABCB6Q9NP58 842 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 HPS4Q9NQG7 708 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 TDP1Q9NUW8 608 aa14.33□□□□□ -0.12
NUP188-211ENST00000550219 C2orf42Q9NWW7 574 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms