RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 RPAP3Q9H6T3 665 aaPredicted RBP11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 SEPT9Q9UHD8 586 aaPredicted RBP11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 A0A0G2JMZ2 1700 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 TCRBV7S3A2A0A539 114 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 CST8O60676 142 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 PSMG1O95456 288 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 GPC3P51654 580 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 EPHB1P54762 984 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 BACE1P56817 501 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 TMPRSS15P98073 1019 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 LMNB2Q03252 620 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 PTK7Q13308 1070 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 C1orf146Q5VVC0 180 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 IZUMO2Q6UXV1 221 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 GPD1LQ8N335 351 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 CCDC33Q8N5R6 958 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 FAM71DQ8N9W8 422 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 PPP1R14CQ8TAE6 165 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 ACTL9Q8TC94 416 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 CHURC1Q8WUH1 139 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 ZNF668Q96K58 619 aaPredicted RBP11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 SENP7Q9BQF6 1050 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 SYNCQ9H7C4 482 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 IRAK4Q9NWZ3 460 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 TAS2R1Q9NYW7 299 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 AFG3L2Q9Y4W6 797 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 ACTL7BQ9Y614 415 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 ARID2Q68CP9 1835 aa11.26□□□□□ -0.61
SMARCC2-208ENST00000550150 SIP14410 1827 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 CCDC160A6NGH7 325 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 LRRIQ4A6NIV6 560 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 C2CD2LO14523 706 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 FCHO1O14526 889 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 ACADSP16219 412 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 BRD2P25440 801 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 WNT7BP56706 349 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 GPX6P59796 221 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 GTF2BQ00403 316 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 OTUD4Q01804 1114 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 SLC34A1Q06495 639 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 MTERF2Q49AM1 385 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 ZCCHC23Q6ZST2 131 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 RIBC1Q8N443 379 aaPredicted RBP11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 EMC1Q8N766 993 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 EFCAB3Q8N7B9 438 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 TMEM161BQ8NDZ6 487 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 FEZF2Q8TBJ5 459 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 ATG4CQ96DT6 458 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 CDCA5Q96FF9 252 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 FAM81BQ96LP2 452 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 IWS1Q96ST2 819 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 CYP4F11Q9HBI6 524 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 GABBR1Q9UBS5 961 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 G3BP2Q9UN86 482 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 LRCH1Q9Y2L9 728 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 hCG_2014768A0A024R1R8 64 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 GTF2H1P32780 548 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 ARL4CP56559 192 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 NLRP11P59045 1033 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 BMPR2Q13873 1038 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 RASA2Q15283 850 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 MAP1SQ66K74 1059 aaPredicted RBP11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 ATP11CQ8NB49 1132 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 ZNF280CQ8ND82 737 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 EXD1Q8NHP7 514 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 CLEC4DQ8WXI8 215 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 ZNF516Q92618 1163 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 ACAP3Q96P50 834 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 SLITRK1Q96PX8 696 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 MOV10L1Q9BXT6 1211 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 ETAA1Q9NY74 926 aa11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 XPO7Q9UIA9 1087 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-208ENST00000550150 LRRC37A2A6NM11 1700 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 E2F8A0AVK6 867 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 PRPF4O43172 522 aaKnown RBP eCLIP11.24□□□□□ -0.614e-10■■■■■ 38.9
SMARCC2-208ENST00000550150 PSTPIP1O43586 416 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 AHCYL1O43865 530 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 TYROBPO43914 113 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 TCEA3O75764 348 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 ZWINTO95229 277 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 INHBEP58166 350 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 TKFCQ3LXA3 575 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 WDR72Q3MJ13 1102 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 ZBTB41Q5SVQ8 909 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 C6orf163Q5TEZ5 329 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 SPOCD1Q6ZMY3 1216 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 PDIK1LQ8N165 341 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 TRIM11Q96F44 468 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 TAAR1Q96RJ0 339 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 SENP1Q9P0U3 644 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 DOCK5Q9H7D0 1870 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 LIN7AO14910 233 aaPredicted RBP11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 CIB2O75838 187 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 LMNAP02545 664 aaKnown RBP11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 OSTNP61366 133 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 FAAP100Q0VG06 881 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 SGSM1Q2NKQ1 1148 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 KBTBD12Q3ZCT8 623 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 SLC39A4Q6P5W5 647 aa11.24□□□□□ -0.61
SMARCC2-208ENST00000550150 MON1BQ7L1V2 547 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms