RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 FUKQ8N0W3 1084 aa20.57■□□□□ 0.88
DDX54-207ENST00000550016 UBR7Q8N806 425 aa20.57■□□□□ 0.88
DDX54-207ENST00000550016 ANKRD20A12PQ8NF67 263 aa20.57■□□□□ 0.88
DDX54-207ENST00000550016 TMEM176AQ96HP8 235 aa20.57■□□□□ 0.88
DDX54-207ENST00000550016 SPATA17Q96L03 361 aa20.57■□□□□ 0.88
DDX54-207ENST00000550016 HEXIM2Q96MH2 286 aaKnown RBP20.57■□□□□ 0.88
DDX54-207ENST00000550016 TAB2Q9NYJ8 693 aa20.57■□□□□ 0.88
DDX54-207ENST00000550016 CDH7Q9ULB5 785 aa20.57■□□□□ 0.88
DDX54-207ENST00000550016 PATJQ8NI35 1801 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 CCDC130P13994 396 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 ZNF18P17022 549 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 CDK11BP21127 795 aaKnown RBP20.56■□□□□ 0.88
DDX54-207ENST00000550016 PON1P27169 355 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 ANXA13P27216 316 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 CCR2P41597 374 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 FAM35AQ86V20 835 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 DHX40Q8IX18 779 aaKnown RBP20.56■□□□□ 0.88
DDX54-207ENST00000550016 SLC4A11Q8NBS3 891 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 SLC2A14Q8TDB8 520 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 FGF13Q92913 245 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 KAT5Q92993 513 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 JAKMIP2Q96AA8 810 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 TCEAL4Q96EI5 215 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 CYFIP2Q96F07 1278 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 SMARCD1Q96GM5 515 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 C8orf48Q96LL4 319 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 FAM81BQ96LP2 452 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 VPS16Q9H269 839 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 HSD3B7Q9H2F3 369 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 ZNF334Q9HCZ1 680 aaPredicted RBP20.56■□□□□ 0.88
DDX54-207ENST00000550016 UBE2TQ9NPD8 197 aaPredicted RBP20.56■□□□□ 0.88
DDX54-207ENST00000550016 FAM49BQ9NUQ9 324 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 EPS15L1Q9UBC2 864 aa20.56■□□□□ 0.88
DDX54-207ENST00000550016 LIMA1Q9UHB6 759 aaKnown RBP20.56■□□□□ 0.88
DDX54-207ENST00000550016 SLC38A8A6NNN8 435 aa20.55■□□□□ 0.88
DDX54-207ENST00000550016 LAMP2P13473 410 aa20.55■□□□□ 0.88
DDX54-207ENST00000550016 HMGA1P17096 107 aaKnown RBP20.55■□□□□ 0.88
DDX54-207ENST00000550016 ACO1P21399 889 aaKnown RBP20.55■□□□□ 0.88
DDX54-207ENST00000550016 ENOSF1Q7L5Y1 443 aa20.55■□□□□ 0.88
DDX54-207ENST00000550016 ING5Q8WYH8 240 aa20.55■□□□□ 0.88
DDX54-207ENST00000550016 KREMEN1Q96MU8 473 aa20.55■□□□□ 0.88
DDX54-207ENST00000550016 HNRNPABQ99729 332 aaKnown RBP20.55■□□□□ 0.88
DDX54-207ENST00000550016 TMEM30AQ9NV96 361 aa20.55■□□□□ 0.88
DDX54-207ENST00000550016 LIMD1Q9UGP4 676 aa20.55■□□□□ 0.88
DDX54-207ENST00000550016 PCDHB4Q9Y5E5 795 aa20.55■□□□□ 0.88
DDX54-207ENST00000550016 LRRC10BA6NIK2 292 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 F8VP50 259 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 MOSPD3O75425 235 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 AP1G2O75843 785 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 NOL4O94818 638 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 CAVIN2O95810 425 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 CEBPBP17676 345 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 CACNA2D1P54289 1103 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 MFAP3P55082 362 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 MTMR3Q13615 1198 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 IQCB1Q15051 598 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 RNF135Q8IUD6 432 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 NPAS3Q8IXF0 933 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 SHKBP1Q8TBC3 707 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 TRMT2BQ96GJ1 504 aaKnown RBP20.54■□□□□ 0.88
DDX54-207ENST00000550016 GDE1Q9NZC3 331 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 UXTQ9UBK9 157 aaPredicted RBP20.54■□□□□ 0.88
DDX54-207ENST00000550016 APEX2Q9UBZ4 518 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 KIAA1257Q9ULG3 409 aa20.54■□□□□ 0.88
DDX54-207ENST00000550016 MAGED2Q9UNF1 606 aaPredicted RBP20.54■□□□□ 0.88
DDX54-207ENST00000550016 BECN2A8MW95 431 aa20.53■□□□□ 0.88
DDX54-207ENST00000550016 GABRR2P28476 465 aa20.53■□□□□ 0.88
DDX54-207ENST00000550016 ADORA2BP29275 332 aa20.53■□□□□ 0.88
DDX54-207ENST00000550016 COPB1P53618 953 aaKnown RBP20.53■□□□□ 0.88
DDX54-207ENST00000550016 PPP1R26Q5T8A7 1209 aaPredicted RBP20.53■□□□□ 0.88
DDX54-207ENST00000550016 TMEM270Q6UE05 265 aa20.53■□□□□ 0.88
DDX54-207ENST00000550016 GAREM2Q75VX8 874 aa20.53■□□□□ 0.88
DDX54-207ENST00000550016 STKLD1Q8NE28 680 aa20.53■□□□□ 0.88
DDX54-207ENST00000550016 MCRS1Q96EZ8 462 aa20.53■□□□□ 0.88
DDX54-207ENST00000550016 MYRFLQ96LU7 910 aa20.53■□□□□ 0.88
DDX54-207ENST00000550016 KCNK16Q96T55 309 aa20.53■□□□□ 0.88
DDX54-207ENST00000550016 IL21Q9HBE4 155 aa20.53■□□□□ 0.88
DDX54-207ENST00000550016 CSNK1G1Q9HCP0 422 aa20.53■□□□□ 0.88
DDX54-207ENST00000550016 SIX2Q9NPC8 291 aa20.53■□□□□ 0.88
DDX54-207ENST00000550016 DMAP1Q9NPF5 467 aaPredicted RBP20.53■□□□□ 0.88
DDX54-207ENST00000550016 KRT82Q9NSB4 513 aa20.53■□□□□ 0.88
DDX54-207ENST00000550016 NUP210Q8TEM1 1887 aaPredicted RBP20.53■□□□□ 0.88
DDX54-207ENST00000550016 A0A1W2PRU2 124 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 TNFRSF10AO00220 468 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 NRG2O14511 850 aaPredicted RBP20.52■□□□□ 0.88
DDX54-207ENST00000550016 PAEPP09466 180 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 FAM200BP0CF97 657 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 GJA1P17302 382 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 CDC25CP30307 473 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 APBA1Q02410 837 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 KCNMA1Q12791 1236 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 ARHGAP17Q68EM7 881 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 GJB7Q6PEY0 223 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 DENND5BQ6ZUT9 1274 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 GCNAQ96QF7 691 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 SMOQ99835 787 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 GPR88Q9GZN0 384 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 ATXN3LQ9H3M9 355 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 CBX8Q9HC52 389 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 EHD2Q9NZN4 543 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms