RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ARFGAP2Q8N6H7 521 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 JOSD2Q8TAC2 188 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 HSFY1Q96LI6 401 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 ADAM7Q9H2U9 754 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 CCDC134Q9H6E4 229 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 NXF1Q9UBU9 619 aaKnown RBP10.51□□□□□ -0.73
RAB5B-206ENST00000549505 SNX24Q9Y343 169 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 TRPV2Q9Y5S1 764 aa10.51□□□□□ -0.73
RAB5B-206ENST00000549505 MDM4O15151 490 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 TREHO43280 583 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 GABBR2O75899 941 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 RECQL4O94761 1208 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 MYZAPP0CAP1 466 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 KDELR1P24390 212 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 MAGEA6P43360 314 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 MRPS6P82932 125 aaKnown RBP10.5□□□□□ -0.73
RAB5B-206ENST00000549505 DSC3Q14574 896 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 HOOK3Q86VS8 718 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 CDR2LQ86X02 465 aaPredicted RBP10.5□□□□□ -0.73
RAB5B-206ENST00000549505 ANKRD52Q8NB46 1076 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 GDAP1L1Q96MZ0 367 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 PCDH9Q9HC56 1237 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 LGALS13Q9UHV8 139 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 EIF3HO15372 352 aaKnown RBP eCLIP10.5□□□□□ -0.73
RAB5B-206ENST00000549505 KRT14P02533 472 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 IVLP07476 585 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 ACADSBP45954 432 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 IRAK1P51617 712 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 ADCY2Q08462 1091 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 PDK2Q15119 407 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 TMEM132AQ24JP5 1023 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 SV2CQ496J9 727 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 PRAMEF19Q5SWL8 479 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 TRNP1Q6NT89 227 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 SLC26A9Q7LBE3 791 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 TTC30AQ86WT1 665 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 RAPGEF5Q92565 580 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 NT5C3BQ969T7 300 aa10.5□□□□□ -0.73
RAB5B-206ENST00000549505 MRPL45Q9BRJ2 306 aaKnown RBP10.5□□□□□ -0.73
RAB5B-206ENST00000549505 CNOT10Q9H9A5 744 aaKnown RBP10.5□□□□□ -0.73
RAB5B-206ENST00000549505 FARP1Q9Y4F1 1045 aaPredicted RBP10.5□□□□□ -0.73
RAB5B-206ENST00000549505 AGTP01019 485 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 TCF4P15884 667 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 GPD1P21695 349 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 IL1R2P27930 398 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 SLC6A3Q01959 620 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 CRHR2Q13324 411 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 MORF4L2Q15014 288 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 ZC3H12AQ5D1E8 599 aaKnown RBP10.49□□□□□ -0.73
RAB5B-206ENST00000549505 FBXO47Q5MNV8 452 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 C6orf118Q5T5N4 469 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 DCUN1D2Q6PH85 259 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 LRRC31Q6UY01 552 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 SCARA5Q6ZMJ2 495 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 FAM228AQ86W67 206 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 TDRPQ86YL5 185 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 DNAJB3Q8WWF6 145 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 HNRNPABQ99729 332 aaKnown RBP10.49□□□□□ -0.73
RAB5B-206ENST00000549505 DPH5Q9H2P9 285 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 TUBGCP4Q9UGJ1 667 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 TSPAN16Q9UKR8 245 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 SHOC2Q9UQ13 582 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 IPPQ9Y573 584 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 DNALI1O14645 258 aaPredicted RBP10.49□□□□□ -0.73
RAB5B-206ENST00000549505 SEPT4O43236 478 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 ZNF189O75820 626 aaPredicted RBP10.49□□□□□ -0.73
RAB5B-206ENST00000549505 FAM155BO75949 473 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 KRT19P08727 400 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 FCGRTP55899 365 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 MKRN3Q13064 507 aaKnown RBP10.49□□□□□ -0.73
RAB5B-206ENST00000549505 MAP3K21Q5TCX8 1036 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 C1orf54Q8WWF1 131 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 SERPINB12Q96P63 405 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 OSMRQ99650 979 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 CXCL16Q9H2A7 254 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 RSAD1Q9HA92 442 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 NMRK2Q9NPI5 230 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 GIT1Q9Y2X7 761 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 KAT6AQ92794 2004 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 E7ESA3 106 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 APOC4-APOC2K7ER74 178 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 M0QYV0 167 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 PTGESO14684 152 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 APOC2P02655 101 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 KRT1P04264 644 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 NR1D1P20393 614 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 PSMA2P25787 234 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 TRIM71Q2Q1W2 868 aaKnown RBP10.49□□□□□ -0.73
RAB5B-206ENST00000549505 BOLA3Q53S33 107 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 C2CD6Q53TS8 623 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 FAM47CQ5HY64 1035 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 SLC9A4Q6AI14 798 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 PCGF5Q86SE9 256 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 HEXIM2Q96MH2 286 aaKnown RBP10.49□□□□□ -0.73
RAB5B-206ENST00000549505 CAPS2Q9BXY5 557 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 NXF3Q9H4D5 531 aaKnown RBP10.49□□□□□ -0.73
RAB5B-206ENST00000549505 SLC38A7Q9NVC3 462 aa10.49□□□□□ -0.73
RAB5B-206ENST00000549505 RCOR3Q9P2K3 495 aaPredicted RBP10.49□□□□□ -0.73
RAB5B-206ENST00000549505 ZMYND8Q9ULU4 1186 aaPredicted RBP10.49□□□□□ -0.73
RAB5B-206ENST00000549505 ACTL7BQ9Y614 415 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms