RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 TDRD10Q5VZ19 366 aaKnown RBP19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 TXNDC8Q6A555 127 aa19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 RALGPS2Q86X27 583 aaPredicted RBP19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 STKLD1Q8NE28 680 aa19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 PCED1BQ96HM7 432 aa19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 CHRDQ9H2X0 955 aa19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 GOLPH3LQ9H4A5 285 aa19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 NXF1Q9UBU9 619 aaKnown RBP19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 FRMD4BQ9Y2L6 1034 aa19.91■□□□□ 0.78
CHMP1A-207ENST00000549328 FAM186AA6NE01 2351 aa19.9■□□□□ 0.78
CHMP1A-207ENST00000549328 PTPN1P18031 435 aaKnown RBP19.9■□□□□ 0.78
CHMP1A-207ENST00000549328 BDNFP23560 247 aa19.9■□□□□ 0.78
CHMP1A-207ENST00000549328 GRIK1P39086 918 aa19.9■□□□□ 0.78
CHMP1A-207ENST00000549328 NUCB2P80303 420 aa19.9■□□□□ 0.78
CHMP1A-207ENST00000549328 CYP27A1Q02318 531 aa19.9■□□□□ 0.78
CHMP1A-207ENST00000549328 NCOA4Q13772 614 aa19.9■□□□□ 0.78
CHMP1A-207ENST00000549328 GUF1Q8N442 669 aaKnown RBP19.9■□□□□ 0.78
CHMP1A-207ENST00000549328 USP13Q92995 863 aaPredicted RBP19.9■□□□□ 0.78
CHMP1A-207ENST00000549328 ZFYVE19Q96K21 471 aa19.9■□□□□ 0.78
CHMP1A-207ENST00000549328 SMG9Q9H0W8 520 aaKnown RBP19.9■□□□□ 0.78
CHMP1A-207ENST00000549328 LMAN1LQ9HAT1 526 aa19.9■□□□□ 0.78
CHMP1A-207ENST00000549328 GDPD2Q9HCC8 539 aa19.9■□□□□ 0.78
CHMP1A-207ENST00000549328 EHD2Q9NZN4 543 aa19.9■□□□□ 0.78
CHMP1A-207ENST00000549328 NME7Q9Y5B8 376 aa19.9■□□□□ 0.78
CHMP1A-207ENST00000549328 A8MXQ7 604 aa19.89■□□□□ 0.77
CHMP1A-207ENST00000549328 TRIM66O15016 1216 aa19.89■□□□□ 0.77
CHMP1A-207ENST00000549328 TADA3O75528 432 aa19.89■□□□□ 0.77
CHMP1A-207ENST00000549328 SGSM1Q2NKQ1 1148 aa19.89■□□□□ 0.77
CHMP1A-207ENST00000549328 ZNF699Q32M78 642 aa19.89■□□□□ 0.77
CHMP1A-207ENST00000549328 ZACNQ401N2 412 aa19.89■□□□□ 0.77
CHMP1A-207ENST00000549328 ZNF667Q5HYK9 610 aa19.89■□□□□ 0.77
CHMP1A-207ENST00000549328 MDH1BQ5I0G3 518 aa19.89■□□□□ 0.77
CHMP1A-207ENST00000549328 CEP135Q66GS9 1140 aa19.89■□□□□ 0.77
CHMP1A-207ENST00000549328 PATJQ8NI35 1801 aa19.89■□□□□ 0.77
CHMP1A-207ENST00000549328 C8orf48Q96LL4 319 aa19.89■□□□□ 0.77
CHMP1A-207ENST00000549328 FAM83CQ9BQN1 747 aa19.89■□□□□ 0.77
CHMP1A-207ENST00000549328 GKN1Q9NS71 199 aa19.89■□□□□ 0.77
CHMP1A-207ENST00000549328 GTSE1Q9NYZ3 720 aa19.89■□□□□ 0.77
CHMP1A-207ENST00000549328 R4GN57 208 aa19.89■□□□□ 0.77
CHMP1A-207ENST00000549328 SPECC1L-ADORA2AF8WAN1 911 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 VNN1O95497 513 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 LMNAP02545 664 aaKnown RBP19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 CHRNB1P11230 501 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 ANXA13P27216 316 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 CTHP32929 405 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 NOP14P78316 857 aaKnown RBP19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 DLG4P78352 724 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 CSTF1Q05048 431 aaKnown RBP19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 ENPEPQ07075 957 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 MTAPQ13126 283 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 ITPRIPL2Q3MIP1 535 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 DENND5BQ6ZUT9 1274 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 B3GALNT2Q8NCR0 500 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 TAF4BQ92750 862 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 ELOVL4Q9GZR5 314 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 CCL26Q9Y258 94 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 FANCMQ8IYD8 2048 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 OBSL1O75147 1896 aa19.88■□□□□ 0.77
CHMP1A-207ENST00000549328 PTPRDP23468 1912 aa19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 USP17L7P0C7H9 530 aa19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 P4HA1P13674 534 aa19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 PFKLP17858 780 aa19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 NR2F2P24468 414 aa19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 RPL13P26373 211 aaKnown RBP19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 SOX9P48436 509 aa19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 FAM160A1Q05DH4 1040 aa19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 LRRC32Q14392 662 aa19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 SV2AQ7L0J3 742 aa19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 NELL1Q92832 810 aa19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 TNIP3Q96KP6 325 aa19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 TTLL2Q9BWV7 592 aa19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 FAM126AQ9BYI3 521 aaPredicted RBP19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 PRMT8Q9NR22 394 aaPredicted RBP19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 MAPK8IP1Q9UQF2 711 aa19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 PCDHGA2Q9Y5H1 932 aa19.87■□□□□ 0.77
CHMP1A-207ENST00000549328 ZNF638Q14966 1978 aaKnown RBP19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 GREB1Q4ZG55 1949 aa19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 TRAV19A0A0A6YYK7 116 aa19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 GOLGA6L4A6NEF3 574 aa19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 F8VP50 259 aa19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 PPP3CCP48454 512 aa19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 PDE6CP51160 858 aa19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 VAMP7P51809 220 aa19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 CDH8P55286 799 aa19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 TNK2Q07912 1038 aa19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 DGKKQ5KSL6 1271 aa19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 C1orf220Q5T0J3 134 aa19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 CC2D1AQ6P1N0 951 aaPredicted RBP19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 INTS8Q75QN2 995 aaKnown RBP19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 FMR1NBQ8N0W7 255 aaPredicted RBP19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 ZBTB44Q8NCP5 570 aa19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 DPEP3Q9H4B8 488 aa19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 SMYD3Q9H7B4 428 aa19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 GCNT4Q9P109 453 aa19.86■□□□□ 0.77
CHMP1A-207ENST00000549328 AKAP3O75969 853 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 ASS1P00966 412 aaKnown RBP19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 CKMP06732 381 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 PSMC2P35998 433 aaKnown RBP19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 CCR3P51677 355 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 MCCD1P59942 119 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms