RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 E4F1Q66K89 784 aaPredicted RBP22.35■■□□□ 1.17
CACNB3-210ENST00000548874 ANKRD54Q6NXT1 300 aa22.35■■□□□ 1.17
CACNB3-210ENST00000548874 TTC30AQ86WT1 665 aa22.35■■□□□ 1.17
CACNB3-210ENST00000548874 ANKRD52Q8NB46 1076 aa22.35■■□□□ 1.17
CACNB3-210ENST00000548874 EPS8L1Q8TE68 723 aa22.35■■□□□ 1.17
CACNB3-210ENST00000548874 CPLX3Q8WVH0 158 aa22.35■■□□□ 1.17
CACNB3-210ENST00000548874 DDX1Q92499 740 aaKnown RBP22.35■■□□□ 1.17
CACNB3-210ENST00000548874 SEPT5Q99719 369 aaPredicted RBP22.35■■□□□ 1.17
CACNB3-210ENST00000548874 NUCKS1Q9H1E3 243 aaKnown RBP22.35■■□□□ 1.17
CACNB3-210ENST00000548874 ZDHHC7Q9NXF8 308 aa22.35■■□□□ 1.17
CACNB3-210ENST00000548874 CLDND1Q9NY35 253 aa22.35■■□□□ 1.17
CACNB3-210ENST00000548874 CLEC1BQ9P126 229 aa22.35■■□□□ 1.17
CACNB3-210ENST00000548874 NOCTQ9UK39 431 aaKnown RBP22.35■■□□□ 1.17
CACNB3-210ENST00000548874 MED7O43513 233 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 RFPL2O75678 378 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 AP1G2O75843 785 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 SOAT2O75908 522 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 POU2F2P09086 479 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 HNRNPA1P09651 372 aaKnown RBP eCLIP22.34■■□□□ 1.17
CACNB3-210ENST00000548874 FAM200BP0CF97 657 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 GSE1Q14687 1217 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 ARID5BQ14865 1188 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 CCDC85BQ15834 202 aaPredicted RBP22.34■■□□□ 1.17
CACNB3-210ENST00000548874 GOLGA7BQ2TAP0 167 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 PPM1LQ5SGD2 360 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 CLEC20AQ6ZU45 233 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 IRF2BP2Q7Z5L9 587 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 NOP9Q86U38 636 aaKnown RBP22.34■■□□□ 1.17
CACNB3-210ENST00000548874 ZMIZ2Q8NF64 920 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 ZNF397Q8NF99 534 aaPredicted RBP22.34■■□□□ 1.17
CACNB3-210ENST00000548874 CMASQ8NFW8 434 aaPredicted RBP22.34■■□□□ 1.17
CACNB3-210ENST00000548874 SYN2Q92777 582 aaPredicted RBP22.34■■□□□ 1.17
CACNB3-210ENST00000548874 C8orf48Q96LL4 319 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 SMOQ99835 787 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 DUSP16Q9BY84 665 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 SFXN1Q9H9B4 322 aa22.34■■□□□ 1.17
CACNB3-210ENST00000548874 TRIM66O15016 1216 aa22.33■■□□□ 1.17
CACNB3-210ENST00000548874 BEST1O76090 585 aa22.33■■□□□ 1.17
CACNB3-210ENST00000548874 MICAL2O94851 1124 aa22.33■■□□□ 1.17
CACNB3-210ENST00000548874 NPR3P17342 541 aa22.33■■□□□ 1.17
CACNB3-210ENST00000548874 HOXB8P17481 243 aaPredicted RBP22.33■■□□□ 1.17
CACNB3-210ENST00000548874 KRT9P35527 623 aa22.33■■□□□ 1.17
CACNB3-210ENST00000548874 GPR15P49685 360 aa22.33■■□□□ 1.17
CACNB3-210ENST00000548874 MRE11P49959 708 aa22.33■■□□□ 1.17
CACNB3-210ENST00000548874 PDE6CP51160 858 aa22.33■■□□□ 1.17
CACNB3-210ENST00000548874 RPL10AP62906 217 aaKnown RBP22.33■■□□□ 1.17
CACNB3-210ENST00000548874 DLX2Q07687 328 aaPredicted RBP22.33■■□□□ 1.17
CACNB3-210ENST00000548874 TWF1Q12792 350 aa22.33■■□□□ 1.17
CACNB3-210ENST00000548874 PLD1Q13393 1074 aa22.33■■□□□ 1.17
CACNB3-210ENST00000548874 SFMBT2Q5VUG0 894 aa22.33■■□□□ 1.17
CACNB3-210ENST00000548874 SYCE2Q6PIF2 218 aa22.33■■□□□ 1.17
CACNB3-210ENST00000548874 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.33■■□□□ 1.17
CACNB3-210ENST00000548874 GPIHBP1Q8IV16 184 aa22.33■■□□□ 1.17
CACNB3-210ENST00000548874 CEP295NLQ96MC4 621 aa22.33■■□□□ 1.17
CACNB3-210ENST00000548874 DMAP1Q9NPF5 467 aaPredicted RBP22.33■■□□□ 1.17
CACNB3-210ENST00000548874 PCDHGC3Q9UN70 934 aa22.33■■□□□ 1.17
CACNB3-210ENST00000548874 F8VP50 259 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 CFHP08603 1231 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 CCDC172P0C7W6 258 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 HNRNPH3P31942 346 aaKnown RBP22.32■■□□□ 1.16
CACNB3-210ENST00000548874 GRIK1P39086 918 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 PRKCIP41743 596 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 ALDH1A3P47895 512 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 BCAT1P54687 386 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 ARID5AQ03989 594 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 ASIC2Q16515 512 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 DDR2Q16832 855 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 ZNF677Q86XU0 584 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 SCN4BQ8IWT1 228 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 ZNF707Q96C28 371 aaPredicted RBP22.32■■□□□ 1.16
CACNB3-210ENST00000548874 MSLNLQ96KJ4 702 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 SPATA17Q96L03 361 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 KCNK16Q96T55 309 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 DNAJC7Q99615 494 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 HESX1Q9UBX0 185 aa22.32■■□□□ 1.16
CACNB3-210ENST00000548874 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.31■■□□□ 1.16
CACNB3-210ENST00000548874 M0QYV0 167 aa22.31■■□□□ 1.16
CACNB3-210ENST00000548874 MFAP3LO75121 409 aa22.31■■□□□ 1.16
CACNB3-210ENST00000548874 LRG1P02750 347 aa22.31■■□□□ 1.16
CACNB3-210ENST00000548874 TPM1P09493 284 aa22.31■■□□□ 1.16
CACNB3-210ENST00000548874 SETSIPP0DME0 302 aa22.31■■□□□ 1.16
CACNB3-210ENST00000548874 MAP3K7CLP57077 242 aa22.31■■□□□ 1.16
CACNB3-210ENST00000548874 BST2Q10589 180 aaKnown RBP22.31■■□□□ 1.16
CACNB3-210ENST00000548874 SDHAF4Q5VUM1 108 aa22.31■■□□□ 1.16
CACNB3-210ENST00000548874 C12orf76Q8N812 135 aaPredicted RBP22.31■■□□□ 1.16
CACNB3-210ENST00000548874 SLC20A1Q8WUM9 679 aa22.31■■□□□ 1.16
CACNB3-210ENST00000548874 SYT11Q9BT88 431 aa22.31■■□□□ 1.16
CACNB3-210ENST00000548874 PRKD2Q9BZL6 878 aa22.31■■□□□ 1.16
CACNB3-210ENST00000548874 UBXN6Q9BZV1 441 aa22.31■■□□□ 1.16
CACNB3-210ENST00000548874 PNPLA8Q9NP80 782 aa22.31■■□□□ 1.16
CACNB3-210ENST00000548874 CCDC195A0A1B0GUA6 201 aa22.3■■□□□ 1.16
CACNB3-210ENST00000548874 HHLA1C9JL84 531 aa22.3■■□□□ 1.16
CACNB3-210ENST00000548874 CHRNB2P17787 502 aa22.3■■□□□ 1.16
CACNB3-210ENST00000548874 SSTR3P32745 418 aaPredicted RBP22.3■■□□□ 1.16
CACNB3-210ENST00000548874 EPHB3P54753 998 aa22.3■■□□□ 1.16
CACNB3-210ENST00000548874 CDR2Q01850 454 aa22.3■■□□□ 1.16
CACNB3-210ENST00000548874 PDE4CQ08493 712 aa22.3■■□□□ 1.16
CACNB3-210ENST00000548874 DENND1BQ6P3S1 775 aa22.3■■□□□ 1.16
CACNB3-210ENST00000548874 UBA3Q8TBC4 463 aa22.3■■□□□ 1.16
CACNB3-210ENST00000548874 FEZF2Q8TBJ5 459 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms