RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 SOX9P48436 509 aa24.65■■□□□ 1.54
CACNB3-208ENST00000548279 USP46P62068 366 aa24.65■■□□□ 1.54
CACNB3-208ENST00000548279 PPP3CAQ08209 521 aa24.65■■□□□ 1.54
CACNB3-208ENST00000548279 VSTM1Q6UX27 236 aa24.65■■□□□ 1.54
CACNB3-208ENST00000548279 FRMD5Q7Z6J6 570 aa24.65■■□□□ 1.54
CACNB3-208ENST00000548279 FAM186BQ8IYM0 893 aa24.65■■□□□ 1.54
CACNB3-208ENST00000548279 MAML2Q8IZL2 1156 aaPredicted RBP24.65■■□□□ 1.54
CACNB3-208ENST00000548279 B3GALNT2Q8NCR0 500 aa24.65■■□□□ 1.54
CACNB3-208ENST00000548279 BPIFB1Q8TDL5 484 aa24.65■■□□□ 1.54
CACNB3-208ENST00000548279 MRPS31Q92665 395 aaKnown RBP24.65■■□□□ 1.54
CACNB3-208ENST00000548279 USP13Q92995 863 aaPredicted RBP24.65■■□□□ 1.54
CACNB3-208ENST00000548279 B3GNT5Q9BYG0 378 aa24.65■■□□□ 1.54
CACNB3-208ENST00000548279 ZNF518BQ9C0D4 1074 aa24.65■■□□□ 1.54
CACNB3-208ENST00000548279 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.65■■□□□ 1.54
CACNB3-208ENST00000548279 UXTQ9UBK9 157 aaPredicted RBP24.65■■□□□ 1.54
CACNB3-208ENST00000548279 NDRG2Q9UN36 371 aaKnown RBP24.65■■□□□ 1.54
CACNB3-208ENST00000548279 ZNF638Q14966 1978 aaKnown RBP24.65■■□□□ 1.54
CACNB3-208ENST00000548279 IKBKBO14920 756 aa24.64■■□□□ 1.54
CACNB3-208ENST00000548279 CLSTN1O94985 981 aa24.64■■□□□ 1.54
CACNB3-208ENST00000548279 HLA-DRAP01903 254 aa24.64■■□□□ 1.54
CACNB3-208ENST00000548279 GRIK1P39086 918 aa24.64■■□□□ 1.54
CACNB3-208ENST00000548279 PRCPP42785 496 aa24.64■■□□□ 1.54
CACNB3-208ENST00000548279 ADAM9Q13443 819 aa24.64■■□□□ 1.54
CACNB3-208ENST00000548279 MON1AQ86VX9 555 aa24.64■■□□□ 1.54
CACNB3-208ENST00000548279 C1orf210Q8IVY1 113 aa24.64■■□□□ 1.54
CACNB3-208ENST00000548279 TTC8Q8TAM2 541 aa24.64■■□□□ 1.54
CACNB3-208ENST00000548279 SPATA20Q8TB22 786 aa24.64■■□□□ 1.54
CACNB3-208ENST00000548279 CLDN23Q96B33 292 aa24.64■■□□□ 1.54
CACNB3-208ENST00000548279 SPATA17Q96L03 361 aa24.64■■□□□ 1.54
CACNB3-208ENST00000548279 SLC22A12Q96S37 553 aa24.64■■□□□ 1.54
CACNB3-208ENST00000548279 HMGXB4Q9UGU5 601 aa24.64■■□□□ 1.54
CACNB3-208ENST00000548279 PCDHA5Q9Y5H7 936 aa24.64■■□□□ 1.54
CACNB3-208ENST00000548279 PROB1E7EW31 1015 aa24.63■■□□□ 1.53
CACNB3-208ENST00000548279 F8VP50 259 aa24.63■■□□□ 1.53
CACNB3-208ENST00000548279 ASS1P00966 412 aaKnown RBP24.63■■□□□ 1.53
CACNB3-208ENST00000548279 DDX6P26196 483 aaKnown RBP eCLIP24.63■■□□□ 1.53
CACNB3-208ENST00000548279 PSMC2P35998 433 aaKnown RBP24.63■■□□□ 1.53
CACNB3-208ENST00000548279 GCLMP48507 274 aa24.63■■□□□ 1.53
CACNB3-208ENST00000548279 TNK2Q07912 1038 aa24.63■■□□□ 1.53
CACNB3-208ENST00000548279 ARHGAP29Q52LW3 1261 aa24.63■■□□□ 1.53
CACNB3-208ENST00000548279 CELF5Q8N6W0 485 aaKnown RBP24.63■■□□□ 1.53
CACNB3-208ENST00000548279 FAM3CQ92520 227 aa24.63■■□□□ 1.53
CACNB3-208ENST00000548279 CCDC34Q96HJ3 373 aa24.63■■□□□ 1.53
CACNB3-208ENST00000548279 BCO2Q9BYV7 579 aa24.63■■□□□ 1.53
CACNB3-208ENST00000548279 GTSE1Q9NYZ3 720 aa24.63■■□□□ 1.53
CACNB3-208ENST00000548279 CACNA1IQ9P0X4 2223 aa24.63■■□□□ 1.53
CACNB3-208ENST00000548279 MYO15AQ9UKN7 3530 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 F5P12259 2224 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 C2orf78A6NCI8 922 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 GADD45BO75293 160 aaPredicted RBP24.62■■□□□ 1.53
CACNB3-208ENST00000548279 CCNE1P24864 410 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 AVPR1AP37288 418 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 PIK3CAP42336 1068 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 ASPAP45381 313 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 ORC1Q13415 861 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 SGSM1Q2NKQ1 1148 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 EDRF1Q3B7T1 1238 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 WDR44Q5JSH3 913 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 ZNF658Q5TYW1 1059 aaPredicted RBP24.62■■□□□ 1.53
CACNB3-208ENST00000548279 PAQR9Q6ZVX9 377 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 INTS8Q75QN2 995 aaKnown RBP24.62■■□□□ 1.53
CACNB3-208ENST00000548279 CSGALNACT1Q8TDX6 532 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 TIGD1Q96MW7 591 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 GSDMAQ96QA5 445 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 CYP2S1Q96SQ9 504 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 NELL2Q99435 816 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 MMRN2Q9H8L6 949 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 APOBEC3GQ9HC16 384 aaKnown RBP24.62■■□□□ 1.53
CACNB3-208ENST00000548279 TRPC7Q9HCX4 862 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 TDP1Q9NUW8 608 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 RMND1Q9NWS8 449 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 ZMYM5Q9UJ78 669 aa24.62■■□□□ 1.53
CACNB3-208ENST00000548279 USP34Q70CQ2 3546 aa24.61■■□□□ 1.53
CACNB3-208ENST00000548279 MAN2B1O00754 1011 aa24.61■■□□□ 1.53
CACNB3-208ENST00000548279 TRIM66O15016 1216 aa24.61■■□□□ 1.53
CACNB3-208ENST00000548279 RPL13P26373 211 aaKnown RBP24.61■■□□□ 1.53
CACNB3-208ENST00000548279 PMS1P54277 932 aaKnown RBP24.61■■□□□ 1.53
CACNB3-208ENST00000548279 TXNDC11Q6PKC3 985 aa24.61■■□□□ 1.53
CACNB3-208ENST00000548279 DENND5BQ6ZUT9 1274 aa24.61■■□□□ 1.53
CACNB3-208ENST00000548279 ASCL5Q7RTU5 278 aa24.61■■□□□ 1.53
CACNB3-208ENST00000548279 TAS1R2Q8TE23 839 aa24.61■■□□□ 1.53
CACNB3-208ENST00000548279 C8orf48Q96LL4 319 aa24.61■■□□□ 1.53
CACNB3-208ENST00000548279 SPATA6Q9NWH7 488 aaPredicted RBP24.61■■□□□ 1.53
CACNB3-208ENST00000548279 GCNT4Q9P109 453 aa24.61■■□□□ 1.53
CACNB3-208ENST00000548279 MRPS17Q9Y2R5 130 aaKnown RBP24.61■■□□□ 1.53
CACNB3-208ENST00000548279 SP9P0CG40 484 aa24.6■■□□□ 1.53
CACNB3-208ENST00000548279 KRT13P13646 458 aa24.6■■□□□ 1.53
CACNB3-208ENST00000548279 ANXA13P27216 316 aa24.6■■□□□ 1.53
CACNB3-208ENST00000548279 RPS9P46781 194 aaKnown RBP24.6■■□□□ 1.53
CACNB3-208ENST00000548279 MCCD1P59942 119 aaPredicted RBP24.6■■□□□ 1.53
CACNB3-208ENST00000548279 COBLL1Q53SF7 1204 aa24.6■■□□□ 1.53
CACNB3-208ENST00000548279 ACOT1Q86TX2 421 aa24.6■■□□□ 1.53
CACNB3-208ENST00000548279 FAM35AQ86V20 835 aa24.6■■□□□ 1.53
CACNB3-208ENST00000548279 ARL14EPQ8N8R7 260 aaPredicted RBP24.6■■□□□ 1.53
CACNB3-208ENST00000548279 TAF4BQ92750 862 aa24.6■■□□□ 1.53
CACNB3-208ENST00000548279 SMARCE1Q969G3 411 aa24.6■■□□□ 1.53
CACNB3-208ENST00000548279 TTLL2Q9BWV7 592 aa24.6■■□□□ 1.53
CACNB3-208ENST00000548279 ELOVL4Q9GZR5 314 aa24.6■■□□□ 1.53
CACNB3-208ENST00000548279 GKN1Q9NS71 199 aa24.6■■□□□ 1.53
CACNB3-208ENST00000548279 HELZP42694 1942 aaKnown RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms