RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 SEMA4AQ9H3S1 761 aa13.32□□□□□ -0.28
GCN1-204ENST00000548132 KIAA1586Q9HCI6 787 aa13.32□□□□□ -0.28
GCN1-204ENST00000548132 FAM13BQ9NYF5 915 aa13.32□□□□□ -0.28
GCN1-204ENST00000548132 GCNT4Q9P109 453 aa13.32□□□□□ -0.28
GCN1-204ENST00000548132 CDH9Q9ULB4 789 aa13.32□□□□□ -0.28
GCN1-204ENST00000548132 MAGED2Q9UNF1 606 aaPredicted RBP13.32□□□□□ -0.28
GCN1-204ENST00000548132 MRPS17Q9Y2R5 130 aaKnown RBP13.32□□□□□ -0.28
GCN1-204ENST00000548132 SPTBN2O15020 2390 aa13.32□□□□□ -0.28
GCN1-204ENST00000548132 RALGAPA1Q6GYQ0 2036 aa13.32□□□□□ -0.28
GCN1-204ENST00000548132 TACC1O75410 805 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 PAPSS2O95340 614 aaPredicted RBP13.31□□□□□ -0.28
GCN1-204ENST00000548132 HSP90AA1P07900 732 aaKnown RBP13.31□□□□□ -0.28
GCN1-204ENST00000548132 DDX6P26196 483 aaKnown RBP eCLIP13.31□□□□□ -0.28
GCN1-204ENST00000548132 RAP1GAPP47736 663 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 NDUFA8P51970 172 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 SNRPFP62306 86 aaKnown RBP13.31□□□□□ -0.28
GCN1-204ENST00000548132 DLG4P78352 724 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 MYO1EQ12965 1108 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 ZNF268Q14587 947 aaPredicted RBP13.31□□□□□ -0.28
GCN1-204ENST00000548132 PON2Q15165 354 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 MDH1BQ5I0G3 518 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 RALGPS2Q86X27 583 aaPredicted RBP13.31□□□□□ -0.28
GCN1-204ENST00000548132 SLC9A9Q8IVB4 645 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 CELF5Q8N6W0 485 aaKnown RBP13.31□□□□□ -0.28
GCN1-204ENST00000548132 PARD3BQ8TEW8 1205 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 IER2Q9BTL4 223 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 TTLL2Q9BWV7 592 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 ZNF518BQ9C0D4 1074 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 VRTNQ9H8Y1 702 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 KIF9Q9HAQ2 790 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 LMAN1LQ9HAT1 526 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 ZSCAN32Q9NX65 697 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 HMGXB4Q9UGU5 601 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 SMG5Q9UPR3 1016 aaKnown RBP13.31□□□□□ -0.28
GCN1-204ENST00000548132 GTF3C3Q9Y5Q9 886 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 LAMA1P25391 3075 aa13.31□□□□□ -0.28
GCN1-204ENST00000548132 KINO60870 393 aaKnown RBP13.3□□□□□ -0.28
GCN1-204ENST00000548132 OLFM2O95897 454 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 CHRM1P11229 460 aaPredicted RBP13.3□□□□□ -0.28
GCN1-204ENST00000548132 PDIA4P13667 645 aaKnown RBP13.3□□□□□ -0.28
GCN1-204ENST00000548132 TNNI1P19237 187 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 BDNFP23560 247 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 CMA1P23946 247 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 RPL10AP62906 217 aaKnown RBP13.3□□□□□ -0.28
GCN1-204ENST00000548132 PLCB2Q00722 1185 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 GAB4Q2WGN9 574 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 ZCWPW2Q504Y3 356 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 FSTL4Q6MZW2 842 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 HS2ST1Q7LGA3 356 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 SPATA2LQ8IUW3 424 aaPredicted RBP13.3□□□□□ -0.28
GCN1-204ENST00000548132 YAF2Q8IY57 180 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 MYCBPAPQ8TBZ2 947 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 CSGALNACT1Q8TDX6 532 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 SPATA17Q96L03 361 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 EBF3Q9H4W6 596 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 C8orf33Q9H7E9 229 aaPredicted RBP13.3□□□□□ -0.28
GCN1-204ENST00000548132 TDP1Q9NUW8 608 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 CGNQ9P2M7 1197 aaKnown RBP13.3□□□□□ -0.28
GCN1-204ENST00000548132 CFAP45Q9UL16 551 aa13.3□□□□□ -0.28
GCN1-204ENST00000548132 SOBPA7XYQ1 873 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 F8VP50 259 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 TULP1O00294 542 aaPredicted RBP13.29□□□□□ -0.28
GCN1-204ENST00000548132 NCAM2O15394 837 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 C4BPAP04003 597 aaKnown RBP13.29□□□□□ -0.28
GCN1-204ENST00000548132 PDGFRBP09619 1106 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 TCF3P15923 654 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 TGM1P22735 817 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 AVPR1AP37288 418 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 DPYDQ12882 1025 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 MTF1Q14872 753 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 VSTM1Q6UX27 236 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 SCARA5Q6ZMJ2 495 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 C4orf50Q6ZRC1 276 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 PAQR9Q6ZVX9 377 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 SCN4BQ8IWT1 228 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 CEP57L1Q8IYX8 460 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 MRPS31Q92665 395 aaKnown RBP13.29□□□□□ -0.28
GCN1-204ENST00000548132 SPATA32Q96LK8 384 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 FNBP1Q96RU3 617 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 B3GNT5Q9BYG0 378 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 EXOC1Q9NV70 894 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 ZMYM5Q9UJ78 669 aa13.29□□□□□ -0.28
GCN1-204ENST00000548132 ANTXRLA6NF34 631 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 CLDN5O00501 218 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 DPYSL4O14531 572 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 EXOC3O60645 756 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 RHOBTB3O94955 611 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 NR3C1P04150 777 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 ASPAP45381 313 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 CCR3P51677 355 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 KPNA1P52294 538 aaPredicted RBP13.28□□□□□ -0.28
GCN1-204ENST00000548132 CDH8P55286 799 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 NOP14P78316 857 aaKnown RBP13.28□□□□□ -0.28
GCN1-204ENST00000548132 KRT85P78386 507 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 FAM160A1Q05DH4 1040 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 LRRC32Q14392 662 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 EML3Q32P44 896 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 ITPRIPL2Q3MIP1 535 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 WDR72Q3MJ13 1102 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 ZACNQ401N2 412 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms