RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 RNF149Q8NC42 400 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.32■□□□□ 0.04
LETMD1-209ENST00000547318 MCRS1Q96EZ8 462 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 CYTH2Q99418 400 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 PAIP2Q9BPZ3 127 aaKnown RBP15.32■□□□□ 0.04
LETMD1-209ENST00000547318 RPF1Q9H9Y2 349 aaKnown RBP15.32■□□□□ 0.04
LETMD1-209ENST00000547318 BATF3Q9NR55 127 aa15.32■□□□□ 0.04
LETMD1-209ENST00000547318 SCAF8Q9UPN6 1271 aaKnown RBP15.32■□□□□ 0.04
LETMD1-209ENST00000547318 TOMM70O94826 608 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 STAU1O95793 577 aaKnown RBP15.31■□□□□ 0.04
LETMD1-209ENST00000547318 DESP17661 470 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 GPX6P59796 221 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 CNTN2Q02246 1040 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 MGAT5Q09328 741 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 DENND1BQ6P3S1 775 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 XYLT1Q86Y38 959 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 AFG1LQ8WV93 481 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 USP6NLQ92738 828 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 SYNCQ9H7C4 482 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 PRMT7Q9NVM4 692 aaPredicted RBP15.31■□□□□ 0.04
LETMD1-209ENST00000547318 ZSWIM8A7E2V4 1837 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 CLUHO75153 1309 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 ZNF487B1APH4 448 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 CHADO15335 359 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 KRT16P08779 473 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 GSTA2P09210 222 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 VDRP11473 427 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 ETS1P14921 441 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 SSTR3P32745 418 aaPredicted RBP15.31■□□□□ 0.04
LETMD1-209ENST00000547318 RPA3P35244 121 aaPredicted RBP15.31■□□□□ 0.04
LETMD1-209ENST00000547318 DNAJC3Q13217 504 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 FASTKD3Q14CZ7 662 aaKnown RBP15.31■□□□□ 0.04
LETMD1-209ENST00000547318 ANGEL2Q5VTE6 544 aaKnown RBP15.31■□□□□ 0.04
LETMD1-209ENST00000547318 TLDC1Q6P9B6 456 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 CHSY1Q86X52 802 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 NT5DC4Q86YG4 428 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 PALM2Q8IXS6 379 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 KCTD6Q8NC69 237 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 CXorf56Q9H5V9 222 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 ASB7Q9H672 318 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 PNPLA8Q9NP80 782 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 CYLDQ9NQC7 956 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 LNPEPQ9UIQ6 1025 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 C15orf41Q9Y2V0 281 aa15.31■□□□□ 0.04
LETMD1-209ENST00000547318 ANK1P16157 1881 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 HBP1O60381 514 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 SPAG7O75391 227 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 ENDOD1O94919 500 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 TGDSO95455 350 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 MCF2P10911 925 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 CD19P15391 556 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 RPL22P35268 128 aaKnown RBP15.3■□□□□ 0.04
LETMD1-209ENST00000547318 BAG6P46379 1132 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 RAD23BP54727 409 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 EIF3EP60228 445 aaKnown RBP15.3■□□□□ 0.04
LETMD1-209ENST00000547318 PTPN11Q06124 597 aaPredicted RBP15.3■□□□□ 0.04
LETMD1-209ENST00000547318 CYP4A22Q5TCH4 519 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 TXNRD3NBQ6F5E7 133 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 C3orf62Q6ZUJ4 267 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 IFNLR1Q8IU57 520 aaPredicted RBP15.3■□□□□ 0.04
LETMD1-209ENST00000547318 C10orf82Q8WW14 230 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 ZNF75CPQ92670 426 aaPredicted RBP15.3■□□□□ 0.04
LETMD1-209ENST00000547318 PAFAH2Q99487 392 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 GPR20Q99678 358 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 SMARCAD1Q9H4L7 1026 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 ETNK1Q9HBU6 452 aa15.3■□□□□ 0.04
LETMD1-209ENST00000547318 SOWAHBA6NEL2 793 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 NOP56O00567 594 aaKnown RBP15.29■□□□□ 0.04
LETMD1-209ENST00000547318 CAPN15O75808 1086 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 KRT4P19013 534 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 ZNF143P52747 638 aaPredicted RBP15.29■□□□□ 0.04
LETMD1-209ENST00000547318 SNX16P57768 344 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 PDE4CQ08493 712 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 PDK2Q15119 407 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 SEZ6Q53EL9 994 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 ZNF394Q53GI3 561 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 CELF3Q5SZQ8 465 aaKnown RBP15.29■□□□□ 0.04
LETMD1-209ENST00000547318 LVRNQ6Q4G3 990 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 FAM47EQ6ZV65 393 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 PRUNE1Q86TP1 453 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 RFX6Q8HWS3 928 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 RHPN2Q8IUC4 686 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 MAP7D3Q8IWC1 876 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 AGAP11Q8TF27 550 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 MZB1Q8WU39 189 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 ERP27Q96DN0 273 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 CNPY3Q9BT09 278 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 SPATC1LQ9H0A9 340 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 MYLK2Q9H1R3 596 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 ZWILCHQ9H900 591 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 PAK5Q9P286 719 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 PNMA3Q9UL41 463 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.29■□□□□ 0.04
LETMD1-209ENST00000547318 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.29■□□□□ 0.04
LETMD1-209ENST00000547318 PTPRFP10586 1907 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 GOLGA8SH3BPF8 625 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 CILPO75339 1184 aa15.29■□□□□ 0.04
LETMD1-209ENST00000547318 TRUB2O95900 331 aaKnown RBP15.29■□□□□ 0.04
LETMD1-209ENST00000547318 LMNAP02545 664 aaKnown RBP15.29■□□□□ 0.04
LETMD1-209ENST00000547318 SRGAP2CP0DJJ0 459 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms