RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 PDGFRBP09619 1106 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 FAM163BP0C2L3 166 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 SOX9P48436 509 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 DLG4P78352 724 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 WDR72Q3MJ13 1102 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 ARHGAP29Q52LW3 1261 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 C1orf220Q5T0J3 134 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 TXNDC8Q6A555 127 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 TXNDC11Q6PKC3 985 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 SPATA2LQ8IUW3 424 aaPredicted RBP11.02□□□□□ -0.65
BEST3-208ENST00000547208 DCLK2Q8N568 766 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 MAB21L3Q8N8X9 362 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 FSIP1Q8NA03 581 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 MYCBPAPQ8TBZ2 947 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 BPIFB1Q8TDL5 484 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 FAM3CQ92520 227 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 NELL1Q92832 810 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 USP13Q92995 863 aaPredicted RBP11.02□□□□□ -0.65
BEST3-208ENST00000547208 NKD2Q969F2 451 aaPredicted RBP11.02□□□□□ -0.65
BEST3-208ENST00000547208 PCED1BQ96HM7 432 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 GCNAQ96QF7 691 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 MMS19Q96T76 1030 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 CHRDQ9H2X0 955 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 DPEP3Q9H4B8 488 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 PRMT8Q9NR22 394 aaPredicted RBP11.02□□□□□ -0.65
BEST3-208ENST00000547208 TMEM30AQ9NV96 361 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 SPATA6Q9NWH7 488 aaPredicted RBP11.02□□□□□ -0.65
BEST3-208ENST00000547208 GTSE1Q9NYZ3 720 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 ZMYM5Q9UJ78 669 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 NDRG2Q9UN36 371 aaKnown RBP11.02□□□□□ -0.65
BEST3-208ENST00000547208 MAGED2Q9UNF1 606 aaPredicted RBP11.02□□□□□ -0.65
BEST3-208ENST00000547208 TRAF3IP3Q9Y228 551 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 MRPS17Q9Y2R5 130 aaKnown RBP11.02□□□□□ -0.65
BEST3-208ENST00000547208 R3HCC1Q9Y3T6 440 aaKnown RBP11.02□□□□□ -0.65
BEST3-208ENST00000547208 ATP6V1DQ9Y5K8 247 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 R4GN57 208 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 MYOFQ9NZM1 2061 aa11.02□□□□□ -0.65
BEST3-208ENST00000547208 OTOGLQ3ZCN5 2332 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 ZNF202O95125 648 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 CHRNB1P11230 501 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 TDGF1P13385 188 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 BDNFP23560 247 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 CCNE1P24864 410 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 DDX6P26196 483 aaKnown RBP eCLIP11.01□□□□□ -0.65
BEST3-208ENST00000547208 ATICP31939 592 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 GNL1P36915 607 aaPredicted RBP11.01□□□□□ -0.65
BEST3-208ENST00000547208 CACNA2D1P54289 1103 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 USP46P62068 366 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 TNK2Q07912 1038 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 MTAPQ13126 283 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 MAPRE1Q15691 268 aaKnown RBP11.01□□□□□ -0.65
BEST3-208ENST00000547208 TAF12Q16514 161 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 ZNF528Q3MIS6 628 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 ZACNQ401N2 412 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 VSTM1Q6UX27 236 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 C4orf50Q6ZRC1 276 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 MON1AQ86VX9 555 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 YAF2Q8IY57 180 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 CELF5Q8N6W0 485 aaKnown RBP11.01□□□□□ -0.65
BEST3-208ENST00000547208 CSGALNACT1Q8TDX6 532 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 ELMO3Q96BJ8 720 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 CHFRQ96EP1 664 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 MSANTD3Q96H12 275 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 SPATA17Q96L03 361 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 SLC22A12Q96S37 553 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 FAM83CQ9BQN1 747 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 SDCBP2Q9H190 292 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 SMYD3Q9H7B4 428 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 MAGEC2Q9UBF1 373 aaPredicted RBP11.01□□□□□ -0.65
BEST3-208ENST00000547208 FBXO4Q9UKT5 387 aa11.01□□□□□ -0.65
BEST3-208ENST00000547208 OTOL1A6NHN0 477 aaPredicted RBP11□□□□□ -0.65
BEST3-208ENST00000547208 SPECC1L-ADORA2AF8WAN1 911 aa11□□□□□ -0.65
BEST3-208ENST00000547208 DPYSL4O14531 572 aa11□□□□□ -0.65
BEST3-208ENST00000547208 NCAM2O15394 837 aa11□□□□□ -0.65
BEST3-208ENST00000547208 LAMTOR5O43504 91 aa11□□□□□ -0.65
BEST3-208ENST00000547208 PTPN1P18031 435 aaKnown RBP11□□□□□ -0.65
BEST3-208ENST00000547208 CTHP32929 405 aa11□□□□□ -0.65
BEST3-208ENST00000547208 AP3M2P53677 418 aa11□□□□□ -0.65
BEST3-208ENST00000547208 CDH8P55286 799 aa11□□□□□ -0.65
BEST3-208ENST00000547208 MCCD1P59942 119 aaPredicted RBP11□□□□□ -0.65
BEST3-208ENST00000547208 TNNC1P63316 161 aa11□□□□□ -0.65
BEST3-208ENST00000547208 TRPC3Q13507 836 aa11□□□□□ -0.65
BEST3-208ENST00000547208 NCOA4Q13772 614 aa11□□□□□ -0.65
BEST3-208ENST00000547208 GAS6Q14393 721 aa11□□□□□ -0.65
BEST3-208ENST00000547208 ZNF268Q14587 947 aaPredicted RBP11□□□□□ -0.65
BEST3-208ENST00000547208 KCNB1Q14721 858 aa11□□□□□ -0.65
BEST3-208ENST00000547208 NFIL3Q16649 462 aa11□□□□□ -0.65
BEST3-208ENST00000547208 ZCWPW2Q504Y3 356 aa11□□□□□ -0.65
BEST3-208ENST00000547208 MDH1BQ5I0G3 518 aa11□□□□□ -0.65
BEST3-208ENST00000547208 MAMSTRQ6ZN01 415 aa11□□□□□ -0.65
BEST3-208ENST00000547208 SCN4BQ8IWT1 228 aa11□□□□□ -0.65
BEST3-208ENST00000547208 OR6B3Q8NGW1 331 aa11□□□□□ -0.65
BEST3-208ENST00000547208 TTC8Q8TAM2 541 aa11□□□□□ -0.65
BEST3-208ENST00000547208 TMC2Q8TDI7 906 aa11□□□□□ -0.65
BEST3-208ENST00000547208 MRPS31Q92665 395 aaKnown RBP11□□□□□ -0.65
BEST3-208ENST00000547208 SYAP1Q96A49 352 aaPredicted RBP11□□□□□ -0.65
BEST3-208ENST00000547208 CEP295NLQ96MC4 621 aa11□□□□□ -0.65
BEST3-208ENST00000547208 B3GNT5Q9BYG0 378 aa11□□□□□ -0.65
BEST3-208ENST00000547208 SNX25Q9H3E2 840 aa11□□□□□ -0.65
BEST3-208ENST00000547208 C8orf33Q9H7E9 229 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms