RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 AGTPBP1Q9UPW5 1226 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 SLC4A7Q9Y6M7 1214 aa14.87□□□□□ -0.03
SRP54-202ENST00000546080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.86□□□□□ -0.03
SRP54-202ENST00000546080 CAPN14A8MX76 684 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 E5RJQ4 531 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 F8VP50 259 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 TSHRP16473 764 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 CDKN2BP42772 138 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 CDK7P50613 346 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 GDF10P55107 478 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 ACTR3P61158 418 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 DYNLT1P63172 113 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 SLC18A2Q05940 514 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 ZNF252P-AS1Q0IIN9 211 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 CDC16Q13042 620 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 LIN52Q52LA3 116 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 C1orf146Q5VVC0 180 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 TXNRD3NBQ6F5E7 133 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 LDHDQ86WU2 507 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 TREML1Q86YW5 311 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 ULK2Q8IYT8 1036 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 ST13P4Q8IZP2 240 aaPredicted RBP14.86□□□□□ -0.03
SRP54-202ENST00000546080 IL31RAQ8NI17 732 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 FBXO27Q8NI29 283 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 RSAD2Q8WXG1 361 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 PPP2R3CQ969Q6 453 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 OLFM3Q96PB7 478 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 THTPAQ9BU02 230 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 C10orf88Q9H8K7 445 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 TAGLN3Q9UI15 199 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 XPO7Q9UIA9 1087 aaKnown RBP14.86□□□□□ -0.03
SRP54-202ENST00000546080 CHMP2BQ9UQN3 213 aa14.86□□□□□ -0.03
SRP54-202ENST00000546080 KLF11O14901 512 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 GYS1P13807 737 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 GARTP22102 1010 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 OTUD4Q01804 1114 aaKnown RBP14.85□□□□□ -0.03
SRP54-202ENST00000546080 KDSRQ06136 332 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 FAAP100Q0VG06 881 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 TKFCQ3LXA3 575 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 ZACNQ401N2 412 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 CFAP157Q5JU67 520 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 TDRD10Q5VZ19 366 aaKnown RBP14.85□□□□□ -0.03
SRP54-202ENST00000546080 DNAJC24Q6P3W2 148 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 DCUN1D2Q6PH85 259 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 NIPA1Q7RTP0 329 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.85□□□□□ -0.03
SRP54-202ENST00000546080 ACER1Q8TDN7 264 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 SPIRE2Q8WWL2 714 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 NCSTNQ92542 709 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 CLPTM1LQ96KA5 538 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 GPAMQ9HCL2 828 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 CNTN3Q9P232 1028 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 ZNRF3Q9ULT6 936 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 PLA2G4CQ9UP65 541 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 TCRBV7S3A2A0A539 114 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 COPEO14579 308 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 TMEM63AO94886 807 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 RPL22P35268 128 aaKnown RBP14.85□□□□□ -0.03
SRP54-202ENST00000546080 ZNF200P98182 395 aaPredicted RBP14.85□□□□□ -0.03
SRP54-202ENST00000546080 MTMR1Q13613 665 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 TRIM42Q8IWZ5 723 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 BSNDQ8WZ55 320 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 MTBPQ96DY7 904 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 NDNQ99608 321 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 WWP1Q9H0M0 922 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 SAE1Q9UBE0 346 aaPredicted RBP14.85□□□□□ -0.03
SRP54-202ENST00000546080 SLC7A8Q9UHI5 535 aa14.85□□□□□ -0.03
SRP54-202ENST00000546080 FKBP6O75344 327 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 NPM3O75607 178 aaKnown RBP14.84□□□□□ -0.03
SRP54-202ENST00000546080 USP1O94782 785 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 MMP8P22894 467 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 MARK2Q7KZI7 788 aaKnown RBP14.84□□□□□ -0.03
SRP54-202ENST00000546080 PRPF39Q86UA1 669 aaKnown RBP14.84□□□□□ -0.03
SRP54-202ENST00000546080 FAM81AQ8TBF8 368 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 ACTL9Q8TC94 416 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 SLC44A1Q8WWI5 657 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 DBNDD1Q9H9R9 158 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 ANKEF1Q9NU02 776 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 TBC1D22BQ9NU19 505 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 PPM1HQ9ULR3 514 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 TMX2Q9Y320 296 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 SLX4Q8IY92 1834 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 C4BPAP04003 597 aaKnown RBP14.84□□□□□ -0.03
SRP54-202ENST00000546080 CALB1P05937 261 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 RANBP1P43487 201 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 HSD17B4P51659 736 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 BASP1P80723 227 aaKnown RBP14.84□□□□□ -0.03
SRP54-202ENST00000546080 TMPRSS15P98073 1019 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 OGDHQ02218 1023 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 PIGHQ14442 188 aaPredicted RBP14.84□□□□□ -0.03
SRP54-202ENST00000546080 PSMD6Q15008 389 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 KBTBD12Q3ZCT8 623 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 TMCO4Q5TGY1 634 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 ATG16L1Q676U5 607 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 ARID3BQ8IVW6 561 aaPredicted RBP14.84□□□□□ -0.03
SRP54-202ENST00000546080 TTC13Q8NBP0 860 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 OPTNQ96CV9 577 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 C7orf26Q96N11 449 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 CSRNP1Q96S65 589 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 SRPK1Q96SB4 655 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms