RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 FNBP1LQ5T0N5 605 aa16.4■□□□□ 0.22
SCAP-215ENST00000545718 NPNTQ6UXI9 565 aa16.4■□□□□ 0.22
SCAP-215ENST00000545718 PALM2Q8IXS6 379 aa16.4■□□□□ 0.22
SCAP-215ENST00000545718 FITM2Q8N6M3 262 aa16.4■□□□□ 0.22
SCAP-215ENST00000545718 PRCCQ92733 491 aaPredicted RBP16.4■□□□□ 0.22
SCAP-215ENST00000545718 NKD2Q969F2 451 aaPredicted RBP16.4■□□□□ 0.22
SCAP-215ENST00000545718 MAK16Q9BXY0 300 aaKnown RBP16.4■□□□□ 0.22
SCAP-215ENST00000545718 FOXP3Q9BZS1 431 aa16.4■□□□□ 0.22
SCAP-215ENST00000545718 ELOVL4Q9GZR5 314 aa16.4■□□□□ 0.22
SCAP-215ENST00000545718 RAB6CQ9H0N0 254 aa16.4■□□□□ 0.22
SCAP-215ENST00000545718 TCRBV7S3A2A0A539 114 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 B4GALT4O60513 344 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 MICAL2O94851 1124 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 RBP3P10745 1247 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 RGS7P49802 495 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 ATP11AP98196 1134 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 HHATQ5VTY9 493 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 OR6B2Q6IFH4 312 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 DRICH1Q6PGQ1 229 aaPredicted RBP16.39■□□□□ 0.21
SCAP-215ENST00000545718 C3orf62Q6ZUJ4 267 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 SLC35B2Q8TB61 432 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 LRRN4Q8WUT4 740 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 C12orf65Q9H3J6 166 aaKnown RBP16.39■□□□□ 0.21
SCAP-215ENST00000545718 FZD8Q9H461 694 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 SMARCAD1Q9H4L7 1026 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 PPP2R3BQ9Y5P8 575 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 SOCS7O14512 581 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 ABHD2P08910 425 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 KRT4P19013 534 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 RPL22P35268 128 aaKnown RBP16.39■□□□□ 0.21
SCAP-215ENST00000545718 CDH6P55285 790 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 MBTD1Q05BQ5 628 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 XYLT1Q86Y38 959 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 GPC2Q8N158 579 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 SLC4A11Q8NBS3 891 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 SPATA18Q8TC71 538 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 ALG13Q9NP73 1137 aaKnown RBP16.39■□□□□ 0.21
SCAP-215ENST00000545718 SHOC2Q9UQ13 582 aa16.39■□□□□ 0.21
SCAP-215ENST00000545718 IGF2BP3O00425 579 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCAP-215ENST00000545718 INSRRP14616 1297 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 GBP2P32456 591 aaPredicted RBP16.38■□□□□ 0.21
SCAP-215ENST00000545718 ARL4CP56559 192 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 SPARCL1Q14515 664 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 C15orf59Q2T9L4 293 aaPredicted RBP16.38■□□□□ 0.21
SCAP-215ENST00000545718 CGB2Q6NT52 195 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 C1orf228Q6PIY5 440 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 RELL1Q8IUW5 271 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 FBXO36Q8NEA4 188 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 CPT1BQ92523 772 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 PTPRHQ9HD43 1115 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 RNF19AQ9NV58 838 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 USP18Q9UMW8 372 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 CHMP2BQ9UQN3 213 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 MCF2LO15068 1137 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 ALOX15BO15296 676 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 GAS2O43903 313 aaKnown RBP16.38■□□□□ 0.21
SCAP-215ENST00000545718 OAS1P00973 400 aaKnown RBP16.38■□□□□ 0.21
SCAP-215ENST00000545718 DARS2Q6PI48 645 aaKnown RBP16.38■□□□□ 0.21
SCAP-215ENST00000545718 PPIL6Q8IXY8 311 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.38■□□□□ 0.21
SCAP-215ENST00000545718 TMEM176AQ96HP8 235 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCAP-215ENST00000545718 XPO7Q9UIA9 1087 aaKnown RBP16.38■□□□□ 0.21
SCAP-215ENST00000545718 MCM3APO60318 1980 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 LTBP3Q9NS15 1303 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 C3orf70A6NLC5 250 aaPredicted RBP16.38■□□□□ 0.21
SCAP-215ENST00000545718 HBP1O60381 514 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 GSTA1P08263 222 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 CDH5P33151 784 aaPredicted RBP16.38■□□□□ 0.21
SCAP-215ENST00000545718 IREB2P48200 963 aaKnown RBP16.38■□□□□ 0.21
SCAP-215ENST00000545718 GCLCP48506 637 aaPredicted RBP16.38■□□□□ 0.21
SCAP-215ENST00000545718 NCALDP61601 193 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 PLPPR4Q7Z2D5 763 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 FAM228AQ86W67 206 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 RIBC1Q8N443 379 aaPredicted RBP16.38■□□□□ 0.21
SCAP-215ENST00000545718 C12orf29Q8N999 325 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 LRRC8CQ8TDW0 803 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 PPP1R13LQ8WUF5 828 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 HPDLQ96IR7 371 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 FGD4Q96M96 766 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 GPATCH2LQ9NWQ4 482 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 RBPJLQ9UBG7 517 aa16.38■□□□□ 0.21
SCAP-215ENST00000545718 IGKV6-21A0A0C4DH24 114 aa16.37■□□□□ 0.21
SCAP-215ENST00000545718 H7C0C1 242 aa16.37■□□□□ 0.21
SCAP-215ENST00000545718 CNMDO75829 334 aa16.37■□□□□ 0.21
SCAP-215ENST00000545718 ZNF286BP0CG31 522 aa16.37■□□□□ 0.21
SCAP-215ENST00000545718 PROZP22891 400 aa16.37■□□□□ 0.21
SCAP-215ENST00000545718 ATP5OP48047 213 aa16.37■□□□□ 0.21
SCAP-215ENST00000545718 GPX6P59796 221 aa16.37■□□□□ 0.21
SCAP-215ENST00000545718 SLC1A5Q15758 541 aa16.37■□□□□ 0.21
SCAP-215ENST00000545718 POLNQ7Z5Q5 900 aa16.37■□□□□ 0.21
SCAP-215ENST00000545718 NIPA2Q8N8Q9 360 aa16.37■□□□□ 0.21
SCAP-215ENST00000545718 FBF1Q8TES7 1133 aa16.37■□□□□ 0.21
SCAP-215ENST00000545718 NLRP7Q8WX94 980 aa16.37■□□□□ 0.21
SCAP-215ENST00000545718 KCNN1Q92952 543 aa16.37■□□□□ 0.21
SCAP-215ENST00000545718 PIWIL1Q96J94 861 aaKnown RBP16.37■□□□□ 0.21
SCAP-215ENST00000545718 NGRNQ9NPE2 291 aaKnown RBP16.37■□□□□ 0.21
SCAP-215ENST00000545718 EURLQ9NYK6 297 aa16.37■□□□□ 0.21
SCAP-215ENST00000545718 PSMC3IPQ9P2W1 217 aaPredicted RBP16.37■□□□□ 0.21
SCAP-215ENST00000545718 PHTF1Q9UMS5 762 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms