RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 MYO1CO00159 1063 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 THP07101 528 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 NPR1P16066 1061 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 EPHB2P29323 1055 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 MPGP29372 298 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 LRPAP1P30533 357 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 SLC44A4Q53GD3 710 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 MTX3Q5HYI7 312 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 DEPDC1Q5TB30 811 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 ZNF626Q68DY1 528 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 PARS2Q7L3T8 475 aaKnown RBP5.92□□□□□ -1.46
SNHG1-224ENST00000545688 DAAM2Q86T65 1068 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 SLC35G2Q8TBE7 412 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 TAAR9Q96RI9 348 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 MESP1Q9BRJ9 268 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 TRIM54Q9BYV2 358 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 ZNF804BA4D1E1 1349 aa5.92□□□□□ -1.46
SNHG1-224ENST00000545688 FER1L4A9Z1Z3 1794 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 A0A087WWL8 130 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 MYBP10242 640 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 CYP2C9P11712 490 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 ADORA2AP29274 412 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 PDE6CP51160 858 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 ARFIP2P53365 341 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 TPTEP56180 551 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 WNT3P56703 355 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 TUBA4AP68366 448 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 SSBP2P81877 361 aaPredicted RBP5.91□□□□□ -1.46
SNHG1-224ENST00000545688 SATB1Q01826 763 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 KRT17Q04695 432 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 Q6ZWC4 215 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 COL23A1Q86Y22 540 aaPredicted RBP5.91□□□□□ -1.46
SNHG1-224ENST00000545688 SLC15A3Q8IY34 581 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 SLC15A4Q8N697 577 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 DNAJC5GQ8N7S2 189 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 RP9Q8TA86 221 aaKnown RBP5.91□□□□□ -1.46
SNHG1-224ENST00000545688 CDH19Q9H159 772 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 ZMAT3Q9HA38 289 aaKnown RBP5.91□□□□□ -1.46
SNHG1-224ENST00000545688 ANLNQ9NQW6 1124 aa5.91□□□□□ -1.46
SNHG1-224ENST00000545688 CCNL1Q9UK58 526 aaPredicted RBP5.91□□□□□ -1.46
SNHG1-224ENST00000545688 A0A1W2PPL8 197 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 NPSP0C0P6 89 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 CYP2D6P10635 497 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 CTGFP29279 349 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 IGBP1P78318 339 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 CEP78Q5JTW2 689 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 EPHA10Q5JZY3 1008 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 ZNF425Q6IV72 752 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 ZNF783Q6ZMS7 281 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 YTHDF3Q7Z739 585 aaKnown RBP5.9□□□□□ -1.46
SNHG1-224ENST00000545688 FAM177A1Q8N128 213 aaPredicted RBP5.9□□□□□ -1.46
SNHG1-224ENST00000545688 ZBTB34Q8NCN2 500 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 CYP2W1Q8TAV3 490 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 OSCP1Q8WVF1 389 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 KBTBD7Q8WVZ9 684 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 SOCS4Q8WXH5 440 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 SH2D3AQ9BRG2 576 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 SEMA4CQ9C0C4 833 aa5.9□□□□□ -1.46
SNHG1-224ENST00000545688 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.9□□□□□ -1.46
SNHG1-224ENST00000545688 PRRT4C9JH25 899 aa5.89□□□□□ -1.47
SNHG1-224ENST00000545688 VNN1O95497 513 aa5.89□□□□□ -1.47
SNHG1-224ENST00000545688 KITP10721 976 aa5.89□□□□□ -1.47
SNHG1-224ENST00000545688 XRCC6P12956 609 aaKnown RBP eCLIP5.89□□□□□ -1.47
SNHG1-224ENST00000545688 KELP23276 732 aa5.89□□□□□ -1.47
SNHG1-224ENST00000545688 CERS1P27544 350 aa5.89□□□□□ -1.47
SNHG1-224ENST00000545688 DGKEP52429 567 aa5.89□□□□□ -1.47
SNHG1-224ENST00000545688 CTBP1Q13363 440 aa5.89□□□□□ -1.47
SNHG1-224ENST00000545688 MGAT5BQ3V5L5 792 aa5.89□□□□□ -1.47
SNHG1-224ENST00000545688 LMBRD2Q68DH5 695 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-224ENST00000545688 EPM2AIP1Q7L775 607 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-224ENST00000545688 NEK8Q86SG6 692 aa5.89□□□□□ -1.47
SNHG1-224ENST00000545688 CHSY1Q86X52 802 aa5.89□□□□□ -1.47
SNHG1-224ENST00000545688 GAS2L3Q86XJ1 694 aa5.89□□□□□ -1.47
SNHG1-224ENST00000545688 QTRT1Q9BXR0 403 aaKnown RBP5.89□□□□□ -1.47
SNHG1-224ENST00000545688 ZIM2Q9NZV7 527 aa5.89□□□□□ -1.47
SNHG1-224ENST00000545688 GABRQQ9UN88 632 aa5.89□□□□□ -1.47
SNHG1-224ENST00000545688 TMEM233B4DJY2 109 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 MYO1FO00160 1098 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 BTN3A1O00481 513 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 TP73O15350 636 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 TJP3O95049 919 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 PDE8BO95263 885 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 KCNA3P22001 575 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 AGFG1P52594 562 aaKnown RBP5.88□□□□□ -1.47
SNHG1-224ENST00000545688 GPSM2P81274 684 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 HOXA4Q00056 320 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-224ENST00000545688 KLF9Q13886 244 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-224ENST00000545688 GTF2H3Q13889 308 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 LY6KQ17RY6 165 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 SUPT20HL1Q3ZLR7 823 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 TRIM72Q6ZMU5 477 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 OVCH2Q7RTZ1 564 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 ABRAQ8N0Z2 381 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 PNLDC1Q8NA58 520 aaKnown RBP5.88□□□□□ -1.47
SNHG1-224ENST00000545688 ABHD11Q8NFV4 315 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 OR6B3Q8NGW1 331 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 RAPGEF4Q8WZA2 1011 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 NAF1Q96HR8 494 aaKnown RBP5.88□□□□□ -1.47
SNHG1-224ENST00000545688 LENG8Q96PV6 779 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-224ENST00000545688 CAMKK2Q96RR4 588 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms