RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 ZNF638Q14966 1978 aaKnown RBP21.23■□□□□ 0.99
CHD4-213ENST00000545584 MYO15AQ9UKN7 3530 aa21.23■□□□□ 0.99
CHD4-213ENST00000545584 TRAV19A0A0A6YYK7 116 aa21.23■□□□□ 0.99
CHD4-213ENST00000545584 TRIM66O15016 1216 aa21.23■□□□□ 0.99
CHD4-213ENST00000545584 KIF20AO95235 890 aa21.23■□□□□ 0.99
CHD4-213ENST00000545584 BDNFP23560 247 aa21.23■□□□□ 0.99
CHD4-213ENST00000545584 MYL6P60660 151 aa21.23■□□□□ 0.99
CHD4-213ENST00000545584 TNK2Q07912 1038 aa21.23■□□□□ 0.99
CHD4-213ENST00000545584 ZNF268Q14587 947 aaPredicted RBP21.23■□□□□ 0.99
CHD4-213ENST00000545584 SLC9A9Q8IVB4 645 aa21.23■□□□□ 0.99
CHD4-213ENST00000545584 ZBTB44Q8NCP5 570 aa21.23■□□□□ 0.99
CHD4-213ENST00000545584 RUBCNQ92622 972 aa21.23■□□□□ 0.99
CHD4-213ENST00000545584 PCED1BQ96HM7 432 aa21.23■□□□□ 0.99
CHD4-213ENST00000545584 SPATA17Q96L03 361 aa21.23■□□□□ 0.99
CHD4-213ENST00000545584 NXF1Q9UBU9 619 aaKnown RBP21.23■□□□□ 0.99
CHD4-213ENST00000545584 HPSEQ9Y251 543 aa21.23■□□□□ 0.99
CHD4-213ENST00000545584 CCL26Q9Y258 94 aa21.23■□□□□ 0.99
CHD4-213ENST00000545584 ZDHHC9Q9Y397 364 aa21.23■□□□□ 0.99
CHD4-213ENST00000545584 PDXKO00764 312 aa21.22■□□□□ 0.99
CHD4-213ENST00000545584 CKMP06732 381 aa21.22■□□□□ 0.99
CHD4-213ENST00000545584 USP17L7P0C7H9 530 aa21.22■□□□□ 0.99
CHD4-213ENST00000545584 CXCL12P48061 93 aa21.22■□□□□ 0.99
CHD4-213ENST00000545584 CASP4P49662 377 aa21.22■□□□□ 0.99
CHD4-213ENST00000545584 AMPD2Q01433 879 aa21.22■□□□□ 0.99
CHD4-213ENST00000545584 RUNX3Q13761 415 aa21.22■□□□□ 0.99
CHD4-213ENST00000545584 PON2Q15165 354 aa21.22■□□□□ 0.99
CHD4-213ENST00000545584 MDH1BQ5I0G3 518 aa21.22■□□□□ 0.99
CHD4-213ENST00000545584 TXNDC11Q6PKC3 985 aa21.22■□□□□ 0.99
CHD4-213ENST00000545584 SPEM1Q8N4L4 309 aa21.22■□□□□ 0.99
CHD4-213ENST00000545584 PARD3BQ8TEW8 1205 aa21.22■□□□□ 0.99
CHD4-213ENST00000545584 FAM83CQ9BQN1 747 aa21.22■□□□□ 0.99
CHD4-213ENST00000545584 A8MXQ7 604 aa21.21■□□□□ 0.99
CHD4-213ENST00000545584 CALUO43852 315 aaPredicted RBP21.21■□□□□ 0.99
CHD4-213ENST00000545584 TADA3O75528 432 aa21.21■□□□□ 0.99
CHD4-213ENST00000545584 RPN1P04843 607 aaKnown RBP21.21■□□□□ 0.99
CHD4-213ENST00000545584 PDE6CP51160 858 aa21.21■□□□□ 0.99
CHD4-213ENST00000545584 FAM160A1Q05DH4 1040 aa21.21■□□□□ 0.99
CHD4-213ENST00000545584 ZNF667Q5HYK9 610 aa21.21■□□□□ 0.99
CHD4-213ENST00000545584 DENND5BQ6ZUT9 1274 aa21.21■□□□□ 0.99
CHD4-213ENST00000545584 NELL1Q92832 810 aa21.21■□□□□ 0.99
CHD4-213ENST00000545584 GZF1Q9H116 711 aaPredicted RBP21.21■□□□□ 0.99
CHD4-213ENST00000545584 KCTD10Q9H3F6 313 aa21.21■□□□□ 0.99
CHD4-213ENST00000545584 EBF3Q9H4W6 596 aa21.21■□□□□ 0.99
CHD4-213ENST00000545584 DMAC2Q9NW81 257 aa21.21■□□□□ 0.99
CHD4-213ENST00000545584 VPS13AQ96RL7 3174 aa21.21■□□□□ 0.99
CHD4-213ENST00000545584 OBSL1O75147 1896 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 NR3C1P04150 777 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 PTPN1P18031 435 aaKnown RBP21.2■□□□□ 0.98
CHD4-213ENST00000545584 NDUFA8P51970 172 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 NCOA4Q13772 614 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 KCNB1Q14721 858 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 PDGFRLQ15198 375 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 ZNF699Q32M78 642 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 TDRD10Q5VZ19 366 aaKnown RBP21.2■□□□□ 0.98
CHD4-213ENST00000545584 SYNPOQ8N3V7 929 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 SUMF1Q8NBK3 374 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 TTC16Q8NEE8 873 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 TMEM174Q8WUU8 243 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 SECISBP2LQ93073 1101 aaKnown RBP21.2■□□□□ 0.98
CHD4-213ENST00000545584 EXOC4Q96A65 974 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 CCDC34Q96HJ3 373 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 CHAMP1Q96JM3 812 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 ELOVL4Q9GZR5 314 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 XYLT2Q9H1B5 865 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 VRTNQ9H8Y1 702 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 RBM12Q9NTZ6 932 aaKnown RBP21.2■□□□□ 0.98
CHD4-213ENST00000545584 TRPM5Q9NZQ8 1165 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 NCDNQ9UBB6 729 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 FRMD4BQ9Y2L6 1034 aa21.2■□□□□ 0.98
CHD4-213ENST00000545584 FAM237AA0A1B0GTK4 181 aa21.19■□□□□ 0.98
CHD4-213ENST00000545584 LRRIQ3A6PVS8 624 aaPredicted RBP21.19■□□□□ 0.98
CHD4-213ENST00000545584 LILRB5O75023 590 aa21.19■□□□□ 0.98
CHD4-213ENST00000545584 P4HA1P13674 534 aa21.19■□□□□ 0.98
CHD4-213ENST00000545584 HDCP19113 662 aa21.19■□□□□ 0.98
CHD4-213ENST00000545584 CLDN10P78369 228 aa21.19■□□□□ 0.98
CHD4-213ENST00000545584 MTF1Q14872 753 aa21.19■□□□□ 0.98
CHD4-213ENST00000545584 CEP135Q66GS9 1140 aa21.19■□□□□ 0.98
CHD4-213ENST00000545584 TRIM68Q6AZZ1 485 aa21.19■□□□□ 0.98
CHD4-213ENST00000545584 ARL14EPQ8N8R7 260 aaPredicted RBP21.19■□□□□ 0.98
CHD4-213ENST00000545584 PLEKHO2Q8TD55 490 aa21.19■□□□□ 0.98
CHD4-213ENST00000545584 C8orf48Q96LL4 319 aa21.19■□□□□ 0.98
CHD4-213ENST00000545584 HPS4Q9NQG7 708 aa21.19■□□□□ 0.98
CHD4-213ENST00000545584 EP300Q09472 2414 aaPredicted RBP21.19■□□□□ 0.98
CHD4-213ENST00000545584 GVINP1Q7Z2Y8 2422 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 A0A1W2PQ27 194 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 A0A1W2PQ64 194 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 A0A1W2PQD8 194 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 F8VP50 259 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 C4BPAP04003 597 aaKnown RBP21.18■□□□□ 0.98
CHD4-213ENST00000545584 PFKLP17858 780 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 PPP3CCP48454 512 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 IFNAR2P48551 515 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 SATB1Q01826 763 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 GRSF1Q12849 480 aaKnown RBP eCLIP21.18■□□□□ 0.98
CHD4-213ENST00000545584 GAS6Q14393 721 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 CPA6Q8N4T0 437 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 B3GALNT2Q8NCR0 500 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 TMC2Q8TDI7 906 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 CYP2S1Q96SQ9 504 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 EPC1Q9H2F5 836 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms