RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, human

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDCA3-210	ENST00000545368	ADGRE1	Q14246	886 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	TAF3	Q5VWG9	929 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	E4F1	Q66K89	784 aa	Predicted RBP	13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	LLGL2	Q6P1M3	1020 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	LILRA6	Q6PI73	481 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	IRF2BP2	Q7Z5L9	587 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	NOP9	Q86U38	636 aa	Known RBP	13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	VPS36	Q86VN1	386 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	SCN4B	Q8IWT1	228 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	TCEAL8	Q8IYN2	117 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	MICALL1	Q8N3F8	863 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	ANKRD52	Q8NB46	1076 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	KREMEN2	Q8NCW0	462 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	HDAC7	Q8WUI4	952 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	PLEKHA4	Q9H4M7	779 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	IGFLR1	Q9H665	355 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	MAN1C1	Q9NR34	630 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	SEPT11	Q9NVA2	429 aa	Known RBP	13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	CHD7	Q9P2D1	2997 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	NOCT	Q9UK39	431 aa	Known RBP	13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	PCDHGC3	Q9UN70	934 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	HCFC2	Q9Y5Z7	792 aa		13.77	□□□□□ -0.21
CDCA3-210	ENST00000545368	NCK2	O43639	380 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	VNN2	O95498	520 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	C8A	P07357	584 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	MME	P08473	750 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	SPATA31D3	P0C874	917 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	SETSIP	P0DME0	302 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	FOSL2	P15408	326 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	EPCAM	P16422	314 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	SSTR3	P32745	418 aa	Predicted RBP	13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	GRIK1	P39086	918 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	ALDH1A3	P47895	512 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	CDR2	Q01850	454 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	TRIM72	Q6ZMU5	477 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	SPATA31D4	Q6ZUB0	917 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	PAQR9	Q6ZVX9	377 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	RTL10	Q7L3V2	364 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	TTC9B	Q8N6N2	239 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	EFHB	Q8N7U6	833 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	TC2N	Q8N9U0	490 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	SLC7A14	Q8TBB6	771 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	SLC22A17	Q8WUG5	538 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	SLC20A1	Q8WUM9	679 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	MYLIP	Q8WY64	445 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	CASP10	Q92851	521 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	PANX2	Q96RD6	677 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	CDX2	Q99626	313 aa	Predicted RBP	13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	AGPAT1	Q99943	283 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	ZSWIM1	Q9BR11	485 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	DUSP16	Q9BY84	665 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	RHOBTB2	Q9BYZ6	727 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	HAUS4	Q9H6D7	363 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	DZANK1	Q9NVP4	752 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	SLC27A5	Q9Y2P5	690 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	YIPF1	Q9Y548	306 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368	INSL5	Q9Y5Q6	135 aa		13.76	□□□□□ -0.21
CDCA3-210	ENST00000545368		F8VP50	259 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	SEC24A	O95486	1093 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	LRG1	P02750	347 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	SKIL	P12757	684 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	TNFAIP3	P21580	790 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	MAP3K7CL	P57077	242 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	HYAL1	Q12794	435 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	VEPH1	Q14D04	833 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	PPM1L	Q5SGD2	360 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	CLEC20A	Q6ZU45	233 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	TTC30A	Q86WT1	665 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	PASD1	Q8IV76	773 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	TMEM35B	Q8NCS4	154 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	UBA3	Q8TBC4	463 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	DDX1	Q92499	740 aa	Known RBP	13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	C8orf48	Q96LL4	319 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	CEP295NL	Q96MC4	621 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	CRISPLD1	Q9H336	500 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	DEF6	Q9H4E7	631 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	CSNK1G1	Q9HCP0	422 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	PATJ	Q8NI35	1801 aa		13.75	□□□□□ -0.21
CDCA3-210	ENST00000545368	TRANK1	O15050	2925 aa		13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	XPO1	O14980	1071 aa	Known RBP	13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	ZMYND10	O75800	440 aa		13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	SOAT2	O75908	522 aa		13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	LSM8	O95777	96 aa	Known RBP	13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	PTMA	P06454	111 aa	Known RBP	13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	HOXD11	P31277	338 aa	Predicted RBP	13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	EPHB3	P54753	998 aa		13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	FMO1	Q01740	532 aa		13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	PDE4C	Q08493	712 aa		13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	TWF1	Q12792	350 aa		13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	DDR2	Q16832	855 aa		13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	HGSNAT	Q68CP4	663 aa		13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	DENND1B	Q6P3S1	775 aa		13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	ELMOD1	Q8N336	334 aa		13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	MSANTD4	Q8NCY6	345 aa		13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	SECISBP2L	Q93073	1101 aa	Known RBP	13.74	□□□□□ -0.21
CDCA3-210	ENST00000545368	NOX5	Q96PH1	765 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms