RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 ZSWIM3Q96MP5 696 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 KIF9Q9HAQ2 790 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 CYP3A43Q9HB55 503 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 IL21Q9HBE4 155 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 METTL14Q9HCE5 456 aaKnown RBP12.59□□□□□ -0.39
HDAC4-216ENST00000544989 CRTAC1Q9NQ79 661 aa12.59□□□□□ -0.39
HDAC4-216ENST00000544989 THG1LQ9NWX6 298 aaKnown RBP12.59□□□□□ -0.39
HDAC4-216ENST00000544989 FRYLO94915 3013 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 KANSL1LA0AUZ9 987 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 SLC38A8A6NNN8 435 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 HEPACAM2A8MVW5 462 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 CHADO15335 359 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 HMGA1P17096 107 aaKnown RBP12.58□□□□□ -0.4
HDAC4-216ENST00000544989 GJA1P17302 382 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 BDNFP23560 247 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 CCNE1P24864 410 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 FCHO2Q0JRZ9 810 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 DDR2Q16832 855 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 MDH1BQ5I0G3 518 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 WDR44Q5JSH3 913 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 CWF19L1Q69YN2 538 aaKnown RBP12.58□□□□□ -0.4
HDAC4-216ENST00000544989 VITQ6UXI7 678 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 ZNF852Q6ZMS4 543 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 DENND5BQ6ZUT9 1274 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 ZC3H3Q8IXZ2 948 aaKnown RBP12.58□□□□□ -0.4
HDAC4-216ENST00000544989 CMTM8Q8IZV2 173 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 CELF5Q8N6W0 485 aaKnown RBP12.58□□□□□ -0.4
HDAC4-216ENST00000544989 TRIML1Q8N9V2 468 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 PCED1BQ96HM7 432 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 CEP63Q96MT8 703 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 DDX23Q9BUQ8 820 aaKnown RBP12.58□□□□□ -0.4
HDAC4-216ENST00000544989 MAGED2Q9UNF1 606 aaPredicted RBP12.58□□□□□ -0.4
HDAC4-216ENST00000544989 SIT1Q9Y3P8 196 aa12.58□□□□□ -0.4
HDAC4-216ENST00000544989 ATP2C2O75185 946 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 F11P03951 625 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 GDI1P31150 447 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 VIPR2P41587 438 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 GCLMP48507 274 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 MXI1P50539 228 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 NOP14P78316 857 aaKnown RBP12.57□□□□□ -0.4
HDAC4-216ENST00000544989 ZNF268Q14587 947 aaPredicted RBP12.57□□□□□ -0.4
HDAC4-216ENST00000544989 ARHGAP29Q52LW3 1261 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 C1orf220Q5T0J3 134 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 MON1AQ86VX9 555 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 CCDC105Q8IYK2 499 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 TMEM105Q8N8V8 129 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 FBXL13Q8NEE6 735 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 CSGALNACT1Q8TDX6 532 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 BCO2Q9BYV7 579 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 PLA2G2FQ9BZM2 168 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 NIF3L1Q9GZT8 377 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 SMYD3Q9H7B4 428 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 C8orf33Q9H7E9 229 aaPredicted RBP12.57□□□□□ -0.4
HDAC4-216ENST00000544989 COMMD8Q9NX08 183 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 ARMCX3Q9UH62 379 aaPredicted RBP12.57□□□□□ -0.4
HDAC4-216ENST00000544989 MAN1B1Q9UKM7 699 aa12.57□□□□□ -0.4
HDAC4-216ENST00000544989 TRAV19A0A0A6YYK7 116 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 HCRTO43612 131 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 GADD45BO75293 160 aaPredicted RBP12.56□□□□□ -0.4
HDAC4-216ENST00000544989 RTN3O95197 1032 aaPredicted RBP12.56□□□□□ -0.4
HDAC4-216ENST00000544989 FGFR1OPO95684 399 aaKnown RBP12.56□□□□□ -0.4
HDAC4-216ENST00000544989 GNA14O95837 355 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 TRIM49P0CI25 452 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 TRIM49CP0CI26 452 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 ASPAP45381 313 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 GPR15P49685 360 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 CYP4F8P98187 520 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 PPP3CAQ08209 521 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 INCA1Q0VD86 236 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 CETN1Q12798 172 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 TCF15Q12870 199 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 MORC3Q14149 939 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 GRM2Q14416 872 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 IER5LQ5T953 404 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 TCERG1LQ5VWI1 586 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 ANKRD40Q6AI12 368 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 POTEHQ6S545 545 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 SCARA5Q6ZMJ2 495 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 FRMD5Q7Z6J6 570 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 FILIP1Q7Z7B0 1213 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 CRYBG2Q8N1P7 616 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 PDZD8Q8NEN9 1154 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 ST13P5Q8NFI4 369 aaPredicted RBP12.56□□□□□ -0.4
HDAC4-216ENST00000544989 PJA1Q8NG27 643 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 BPIFB1Q8TDL5 484 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 OVCA2Q8WZ82 227 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 SMARCD1Q96GM5 515 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 SLITRK1Q96PX8 696 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 IER2Q9BTL4 223 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 MED10Q9BTT4 135 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 TTLL2Q9BWV7 592 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 SLC46A2Q9BY10 475 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 TRPM5Q9NZQ8 1165 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 CACNA1BQ00975 2339 aa12.56□□□□□ -0.4
HDAC4-216ENST00000544989 KMT2BQ9UMN6 2715 aaPredicted RBP12.55□□□□□ -0.4
HDAC4-216ENST00000544989 F8VP50 259 aa12.55□□□□□ -0.4
HDAC4-216ENST00000544989 PMM2O15305 246 aa12.55□□□□□ -0.4
HDAC4-216ENST00000544989 USP17L7P0C7H9 530 aa12.55□□□□□ -0.4
HDAC4-216ENST00000544989 CDR1P51861 262 aa12.55□□□□□ -0.4
HDAC4-216ENST00000544989 CDH8P55286 799 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms