RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 ZBTB7AO95365 584 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 ARIH2O95376 493 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 ALADP13716 330 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 CD19P15391 556 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 TCF4P15884 667 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 ALDH3A1P30838 453 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 SCNN1AP37088 669 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 CTCFP49711 727 aaPredicted RBP13.06□□□□□ -0.32
PAAF1-215ENST00000544909 ELF3P78545 371 aaPredicted RBP13.06□□□□□ -0.32
PAAF1-215ENST00000544909 PLCB3Q01970 1234 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 LAMC2Q13753 1193 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 PDK2Q15119 407 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 TMED2Q15363 201 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 KCTD19Q17RG1 926 aaPredicted RBP13.06□□□□□ -0.32
PAAF1-215ENST00000544909 DENND1BQ6P3S1 775 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 ZDHHC17Q8IUH5 632 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 MAP7D3Q8IWC1 876 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 ZBED8Q8IZ13 594 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 ANKRD42Q8N9B4 389 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 PYROXD1Q8WU10 500 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 CPT1BQ92523 772 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 PITPNM3Q9BZ71 974 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 SYNCQ9H7C4 482 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 PRDM16Q9HAZ2 1276 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 IFT122Q9HBG6 1241 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 TXLNGQ9NUQ3 528 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 RPL26L1Q9UNX3 145 aaKnown RBP13.06□□□□□ -0.32
PAAF1-215ENST00000544909 USH1CQ9Y6N9 552 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 CLUHO75153 1309 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 DPYSL4O14531 572 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 CHADO15335 359 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 ZNF189O75820 626 aaPredicted RBP13.06□□□□□ -0.32
PAAF1-215ENST00000544909 IL1BP01584 269 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 ERBB2P04626 1255 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 CREB1P16220 341 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 GBP2P32456 591 aaPredicted RBP13.06□□□□□ -0.32
PAAF1-215ENST00000544909 GPD2P43304 727 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 MAGEA6P43360 314 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 CDC42EP1Q00587 391 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 PDIA2Q13087 525 aaKnown RBP13.06□□□□□ -0.32
PAAF1-215ENST00000544909 SETDB1Q15047 1291 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 LRRC14Q15048 493 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 PREPLQ4J6C6 727 aaPredicted RBP13.06□□□□□ -0.32
PAAF1-215ENST00000544909 SEZ6Q53EL9 994 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 PRAMEF18Q5VWM3 479 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 EFCAB12Q6NXP0 572 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 LCLAT1Q6UWP7 414 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 ARCQ7LC44 396 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 SULF1Q8IWU6 871 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 STK32AQ8WU08 396 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 CPXM1Q96SM3 734 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 TMEM121Q9BTD3 319 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 VPS37BQ9H9H4 285 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 ARHGEF3Q9NR81 526 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 ABCF3Q9NUQ8 709 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 USP18Q9UMW8 372 aa13.06□□□□□ -0.32
PAAF1-215ENST00000544909 UBOX5O94941 541 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 GSTA2P09210 222 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 CXCL8P10145 99 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 EZRP15311 586 aaKnown RBP13.05□□□□□ -0.32
PAAF1-215ENST00000544909 KRT15P19012 456 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 TGM2P21980 687 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 OSBPP22059 807 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 WDR4P57081 412 aaKnown RBP13.05□□□□□ -0.32
PAAF1-215ENST00000544909 NCALDP61601 193 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 RNASELQ05823 741 aaKnown RBP13.05□□□□□ -0.32
PAAF1-215ENST00000544909 MOGSQ13724 837 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 NOMO1Q15155 1222 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 AMHR2Q16671 573 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 BOLA3Q53S33 107 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 ASRGL1Q7L266 308 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 LRRC71Q8N4P6 559 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 ARFGAP1Q8N6T3 406 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 GLIS1Q8NBF1 620 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 CFAP61Q8NHU2 1237 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 DCPSQ96C86 337 aaKnown RBP13.05□□□□□ -0.32
PAAF1-215ENST00000544909 LRRC39Q96DD0 335 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 NLRP4Q96MN2 994 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 TSPAN18Q96SJ8 248 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 CYTH2Q99418 400 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 MMP19Q99542 508 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 VPS11Q9H270 941 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 PLEKHA5Q9HAU0 1116 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 VTA1Q9NP79 307 aa13.05□□□□□ -0.32
PAAF1-215ENST00000544909 DNAJC17Q9NVM6 304 aaKnown RBP13.05□□□□□ -0.32
PAAF1-215ENST00000544909 UNCXA6NJT0 531 aa13.04□□□□□ -0.32
PAAF1-215ENST00000544909 EDF1O60869 148 aaKnown RBP13.04□□□□□ -0.32
PAAF1-215ENST00000544909 ECM2O94769 699 aaPredicted RBP13.04□□□□□ -0.32
PAAF1-215ENST00000544909 UNC5CO95185 931 aa13.04□□□□□ -0.32
PAAF1-215ENST00000544909 TRUB2O95900 331 aaKnown RBP13.04□□□□□ -0.32
PAAF1-215ENST00000544909 GH1P01241 217 aa13.04□□□□□ -0.32
PAAF1-215ENST00000544909 IFNB1P01574 187 aa13.04□□□□□ -0.32
PAAF1-215ENST00000544909 STAG3L1P0CL83 205 aa13.04□□□□□ -0.32
PAAF1-215ENST00000544909 NQO1P15559 274 aaKnown RBP13.04□□□□□ -0.32
PAAF1-215ENST00000544909 IL1R2P27930 398 aa13.04□□□□□ -0.32
PAAF1-215ENST00000544909 NF2P35240 595 aa13.04□□□□□ -0.32
PAAF1-215ENST00000544909 RASSF2P50749 326 aa13.04□□□□□ -0.32
PAAF1-215ENST00000544909 RBP5P82980 135 aa13.04□□□□□ -0.32
PAAF1-215ENST00000544909 TMEM132AQ24JP5 1023 aa13.04□□□□□ -0.32
PAAF1-215ENST00000544909 ZNF394Q53GI3 561 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms