RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	KCNA3	P22001	575 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	TM4SF4	P48230	202 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	SP2	Q02086	613 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	PTPRR	Q15256	657 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	SLC15A3	Q8IY34	581 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	ATG4A	Q8WYN0	398 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	TFAP2B	Q92481	460 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	FKBP10	Q96AY3	582 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	TMPRSS5	Q9H3S3	457 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	XPNPEP3	Q9NQH7	507 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	PACSIN3	Q9UKS6	424 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	SALL3	Q9BXA9	1300 aa		6.39	□□□□□ -1.39
LEMD3-205	ENST00000544506	LOC102723971	A0A1B0GUV8	181 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	WDR27	A2RRH5	827 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	CCP110	O43303	1012 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	GC	P02774	474 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	ANXA2	P07355	339 aa	Known RBP	6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	TYRP1	P17643	537 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	ACVR2A	P27037	513 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	STT3A	P46977	705 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	INHBC	P55103	352 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	MRPS35	P82673	323 aa	Known RBP	6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	DPT	Q07507	201 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	INSC	Q1MX18	579 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	NBPF8	Q3BBV2	869 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	SYCP2L	Q5T4T6	812 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	KLHDC7A	Q5VTJ3	777 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	PCSK4	Q6UW60	755 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	YAF2	Q8IY57	180 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	CCDC33	Q8N5R6	958 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	RNF152	Q8N8N0	203 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	SVIP	Q8NHG7	77 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	ACTRT2	Q8TDY3	377 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	KLC4	Q9NSK0	619 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	LRIT1	Q9P2V4	623 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	RGS17	Q9UGC6	210 aa	Predicted RBP	6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	CDY1	Q9Y6F8	540 aa		6.38	□□□□□ -1.39
LEMD3-205	ENST00000544506	RASA4B	C9J798	803 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	ADM5	C9JUS6	153 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	RASA4	O43374	803 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	PROZ	P22891	400 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	ADORA2A	P29274	412 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	PLA2G5	P39877	138 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	PDE6C	P51160	858 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	ALDH5A1	P51649	535 aa	Predicted RBP	6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	MAPK10	P53779	464 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	PRKAG1	P54619	331 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	AK2	P54819	239 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	ARHGEF7	Q14155	803 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	SLC29A2	Q14542	456 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	TBCC	Q15814	346 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	CACHD1	Q5VU97	1274 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	KCTD20	Q7Z5Y7	419 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	PEG10	Q86TG7	708 aa	Known RBP	6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	IQCD	Q96DY2	449 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	PBK	Q96KB5	322 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	ALG8	Q9BVK2	526 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	DNMT3B	Q9UBC3	853 aa	Known RBP	6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	DKK3	Q9UBP4	350 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506	ZNF212	Q9UDV6	495 aa		6.37	□□□□□ -1.39
LEMD3-205	ENST00000544506		A0A087X1B8	175 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	RAB27B	O00194	218 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	ERBB2	P04626	1255 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	IL1R2	P27930	398 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	PTDSS1	P48651	473 aa	Known RBP	6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	ITGA8	P53708	1063 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	PTCHD3	Q3KNS1	767 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	TEDDM1	Q5T9Z0	273 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	DEPDC1	Q5TB30	811 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	KAZN	Q674X7	775 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	MAVS	Q7Z434	540 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	DTX2	Q86UW9	622 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	TMEM171	Q8WVE6	324 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	IPCEF1	Q8WWN9	437 aa	Predicted RBP	6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	PPP2R3C	Q969Q6	453 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	RIPOR3	Q96MK2	946 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	DHX36	Q9H2U1	1008 aa	Known RBP	6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	STARD7	Q9NQZ5	370 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	EHD3	Q9NZN3	535 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	FOXJ2	Q9P0K8	574 aa		6.36	□□□□□ -1.39
LEMD3-205	ENST00000544506	NCK2	O43639	380 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	RRP9	O43818	475 aa	Known RBP	6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	TLR5	O60602	858 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	SRGAP2	O75044	1071 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	RHOBTB3	O94955	611 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	RASAL1	O95294	804 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	IFIT2	P09913	472 aa	Known RBP	6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	TNFSF4	P23510	183 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	CPT1A	P50416	773 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	CLCN2	P51788	898 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	ZNF169	Q14929	603 aa	Predicted RBP	6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	NPY5R	Q15761	445 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	FCRL6	Q6DN72	434 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	RNF44	Q7L0R7	432 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	SPART	Q8N0X7	666 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	ATP11C	Q8NB49	1132 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	DNAJB14	Q8TBM8	379 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	ATRIP	Q8WXE1	791 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	SLC9A6	Q92581	669 aa		6.35	□□□□□ -1.39
LEMD3-205	ENST00000544506	RFK	Q969G6	155 aa		6.35	□□□□□ -1.39

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