RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ARHGAP17Q68EM7 881 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SMYD5Q6GMV2 418 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 TMC5Q6UXY8 1006 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 PAQR9Q6ZVX9 377 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SLC47A2Q86VL8 602 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 GPIHBP1Q8IV16 184 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 VSTM4Q8IW00 320 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CPLX3Q8WVH0 158 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 TFAP2BQ92481 460 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 IQCDQ96DY2 449 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 HESX1Q9UBX0 185 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 TSPAN16Q9UKR8 245 aa15.35■□□□□ 0.05
TNFRSF1A-216ENST00000543995 GOLGA6L3A6NEY3 463 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 F8VP50 259 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 H3BQ06 376 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 O00370 1275 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 XYLBO75191 536 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ATF6P18850 670 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SSTR3P32745 418 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CLCN1P35523 988 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 PDE6CP51160 858 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ZNF75DP51815 510 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 MAP3K7CLP57077 242 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SLC8A3P57103 927 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ARID5AQ03989 594 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 STILQ15468 1287 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 TAF12Q16514 161 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SDHAF4Q5VUM1 108 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CES5AQ6NT32 575 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SYCE2Q6PIF2 218 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ZNF397Q8NF99 534 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 GPR152Q8TDT2 470 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 GIPC2Q8TF65 315 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ZNF606Q8WXB4 792 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ZNF512Q96ME7 567 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 PRKD2Q9BZL6 878 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 EDEM3Q9BZQ6 932 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 TTYH3Q9C0H2 523 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 DMAP1Q9NPF5 467 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CD207Q9UJ71 328 aa15.34■□□□□ 0.05
TNFRSF1A-216ENST00000543995 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 A0A1W2PQJ5 194 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 LRRC53A6NM62 1247 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 M0QYV0 167 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 TPM1P09493 284 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CCDC172P0C7W6 258 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 NPR3P17342 541 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CACNA2D1P54289 1103 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ITIH3Q06033 890 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 TRIM14Q14142 442 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CNGA2Q16280 664 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 TMC6Q7Z403 805 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 FMNL3Q8IVF7 1028 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SMG7Q92540 1137 aaKnown RBP15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 BAP1Q92560 729 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 KCNK16Q96T55 309 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 DUSP16Q9BY84 665 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 MYO6Q9UM54 1294 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 COG5Q9UP83 839 aa15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 LUC7L2Q9Y383 392 aaKnown RBP15.33■□□□□ 0.05
TNFRSF1A-216ENST00000543995 C2orf16Q68DN1 1984 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 REV3LO60673 3130 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 MICAL2O94851 1124 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 GYPCP04921 128 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CYP11B1P15538 503 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 KRT9P35527 623 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 BCAT1P54687 386 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 SFMBT2Q5VUG0 894 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 LCLAT1Q6UWP7 414 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CLEC20AQ6ZU45 233 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ITIH5Q86UX2 942 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 TTC30AQ86WT1 665 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ANKRD52Q8NB46 1076 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 STKLD1Q8NE28 680 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CMASQ8NFW8 434 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 UBA3Q8TBC4 463 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 MRFAP1L1Q96HT8 127 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 MSLNLQ96KJ4 702 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 SMOQ99835 787 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ZSWIM1Q9BR11 485 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 PDCL3Q9H2J4 239 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ADAM7Q9H2U9 754 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CAPN11Q9UMQ6 739 aa15.33■□□□□ 0.04
TNFRSF1A-216ENST00000543995 BEST1O76090 585 aa15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 FERP16591 822 aa15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CASP14P31944 242 aa15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 BST2Q10589 180 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 IFRD2Q12894 506 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ATAT1Q5SQI0 421 aa15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 TAF3Q5VWG9 929 aa15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 DNAJB7Q7Z6W7 309 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 GPR149Q86SP6 731 aa15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 DRC7Q8IY82 874 aa15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 FEZF2Q8TBJ5 459 aa15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ZNF707Q96C28 371 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 C8orf48Q96LL4 319 aa15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CORO1BQ9BR76 489 aa15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 NUCKS1Q9H1E3 243 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1A-216ENST00000543995 S1PR5Q9H228 398 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms