RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 JDP2Q8WYK2 163 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 FAM84AQ96KN4 292 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 HAPLN2Q9GZV7 340 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 AGTPBP1Q9UPW5 1226 aa14.39□□□□□ -0.11
VPS33A-208ENST00000543633 COL11A1P12107 1806 aaPredicted RBP14.38□□□□□ -0.11
VPS33A-208ENST00000543633 PHIPQ8WWQ0 1821 aa14.38□□□□□ -0.11
VPS33A-208ENST00000543633 IFNB1P01574 187 aa14.38□□□□□ -0.11
VPS33A-208ENST00000543633 ATP5BP06576 529 aaKnown RBP14.38□□□□□ -0.11
VPS33A-208ENST00000543633 OTUD4Q01804 1114 aaKnown RBP14.38□□□□□ -0.11
VPS33A-208ENST00000543633 BAATQ14032 418 aaPredicted RBP14.38□□□□□ -0.11
VPS33A-208ENST00000543633 ACAP1Q15027 740 aa14.38□□□□□ -0.11
VPS33A-208ENST00000543633 GNPTABQ3T906 1256 aa14.38□□□□□ -0.11
VPS33A-208ENST00000543633 ANO7Q6IWH7 933 aa14.38□□□□□ -0.11
VPS33A-208ENST00000543633 IRGCQ6NXR0 463 aa14.38□□□□□ -0.11
VPS33A-208ENST00000543633 ZPBP2Q6X784 338 aa14.38□□□□□ -0.11
VPS33A-208ENST00000543633 C3orf62Q6ZUJ4 267 aa14.38□□□□□ -0.11
VPS33A-208ENST00000543633 RHPN2Q8IUC4 686 aa14.38□□□□□ -0.11
VPS33A-208ENST00000543633 CDAN1Q8IWY9 1227 aa14.38□□□□□ -0.11
VPS33A-208ENST00000543633 TRIM42Q8IWZ5 723 aa14.38□□□□□ -0.11
VPS33A-208ENST00000543633 ACTL9Q8TC94 416 aa14.38□□□□□ -0.11
VPS33A-208ENST00000543633 NSL1Q96IY1 281 aa14.38□□□□□ -0.11
VPS33A-208ENST00000543633 MIPEPQ99797 713 aa14.38□□□□□ -0.11
VPS33A-208ENST00000543633 FRMD8Q9BZ67 464 aaPredicted RBP14.38□□□□□ -0.11
VPS33A-208ENST00000543633 WDR35Q9P2L0 1181 aa14.38□□□□□ -0.11
VPS33A-208ENST00000543633 RLFQ13129 1914 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 SIGLEC16A6NMB1 481 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 VWA5AO00534 786 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 ECM2O94769 699 aaPredicted RBP14.37□□□□□ -0.11
VPS33A-208ENST00000543633 NPTXRO95502 500 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 MT-ND3P03897 115 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 WEE2P0C1S8 567 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 RPL22P35268 128 aaKnown RBP14.37□□□□□ -0.11
VPS33A-208ENST00000543633 PCK1P35558 622 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 RFC5P40937 340 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 ETV4P43268 484 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 ARFIP2P53365 341 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 KLC1Q07866 573 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 PRKD1Q15139 912 aaPredicted RBP14.37□□□□□ -0.11
VPS33A-208ENST00000543633 MTERF2Q49AM1 385 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 PLEKHG4Q58EX7 1191 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 CAPN12Q6ZSI9 719 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 PALM2Q8IXS6 379 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 FBXO36Q8NEA4 188 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 OR5B17Q8NGF7 314 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 RSAD2Q8WXG1 361 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 ZNF333Q96JL9 665 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 WDR83Q9BRX9 315 aaKnown RBP14.37□□□□□ -0.11
VPS33A-208ENST00000543633 CADM1Q9BY67 442 aaKnown RBP14.37□□□□□ -0.11
VPS33A-208ENST00000543633 LHX5Q9H2C1 402 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 PNPLA8Q9NP80 782 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 APOC4-APOC2K7ER74 178 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 NVLO15381 856 aaKnown RBP14.37□□□□□ -0.11
VPS33A-208ENST00000543633 APOC2P02655 101 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 OATP04181 439 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 SSTR1P30872 391 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 FNBP1LQ5T0N5 605 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 ANKRD22Q5VYY1 191 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 TXNRD3NBQ6F5E7 133 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 GPAT2Q6NUI2 795 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 RFWD2Q8NHY2 731 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 SLC44A1Q8WWI5 657 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 MKS1Q9NXB0 559 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 LRCH1Q9Y2L9 728 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 PPME1Q9Y570 386 aa14.37□□□□□ -0.11
VPS33A-208ENST00000543633 A8MXQ7 604 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 SPATA31C2B4DYI2 1134 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 FZD9O00144 591 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 LPXNO60711 386 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 ATG7O95352 703 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 LINGO3P0C6S8 592 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 KDELR1P24390 212 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 SATB1Q01826 763 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 EFTUD2Q15029 972 aaKnown RBP eCLIP14.36□□□□□ -0.11
VPS33A-208ENST00000543633 MUM1Q2TAK8 710 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 MSS51Q4VC12 460 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 HP1BP3Q5SSJ5 553 aaPredicted RBP14.36□□□□□ -0.11
VPS33A-208ENST00000543633 CCDC62Q6P9F0 684 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 PAXIP1Q6ZW49 1069 aaPredicted RBP14.36□□□□□ -0.11
VPS33A-208ENST00000543633 TTC8Q8TAM2 541 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 HAUS1Q96CS2 278 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 NIFKQ9BYG3 293 aaKnown RBP14.36□□□□□ -0.11
VPS33A-208ENST00000543633 RPAP3Q9H6T3 665 aaPredicted RBP14.36□□□□□ -0.11
VPS33A-208ENST00000543633 HEY2Q9UBP5 337 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 MAFBQ9Y5Q3 323 aaPredicted RBP14.36□□□□□ -0.11
VPS33A-208ENST00000543633 LRRIQ4A6NIV6 560 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 GSC2O15499 205 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 MED7O43513 233 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 CST8O60676 142 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 RGS20O76081 388 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 TMEM63AO94886 807 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 BRD2P25440 801 aaKnown RBP14.36□□□□□ -0.11
VPS33A-208ENST00000543633 PSMA2P25787 234 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 REPS2Q8NFH8 660 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 ZBTB45Q96K62 511 aaPredicted RBP14.36□□□□□ -0.11
VPS33A-208ENST00000543633 TARS2Q9BW92 718 aaKnown RBP14.36□□□□□ -0.11
VPS33A-208ENST00000543633 TMEM120AQ9BXJ8 343 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 SYNCQ9H7C4 482 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 CISHQ9NSE2 258 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 ARL8BQ9NVJ2 186 aa14.36□□□□□ -0.11
VPS33A-208ENST00000543633 CNTN3Q9P232 1028 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms