RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 KDELR1P24390 212 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 GCLCP48506 637 aaPredicted RBP14.62□□□□□ -0.07
MSH2-206ENST00000543555 TAZQ16635 292 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 NT5DC4Q86YG4 428 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 CACNA2D3Q8IZS8 1091 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 PRMT1Q99873 361 aaKnown RBP14.62□□□□□ -0.07
MSH2-206ENST00000543555 TMEM121Q9BTD3 319 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 PCDH9Q9HC56 1237 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 UNCXA6NJT0 531 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 MMP3P08254 477 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 ABHD2P08910 425 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 SLC10A3P09131 477 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 SMPD1P17405 629 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 NDST1P52848 882 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 DYNLT1P63172 113 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 PLCB3Q01970 1234 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 STAT4Q14765 748 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 DPP9Q86TI2 863 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 ZNF410Q86VK4 478 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 FAM124BQ9H5Z6 455 aaPredicted RBP14.62□□□□□ -0.07
MSH2-206ENST00000543555 LGALS13Q9UHV8 139 aa14.62□□□□□ -0.07
MSH2-206ENST00000543555 SGK1O00141 431 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 CST8O60676 142 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 CPP00450 1065 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 HOXD8P13378 290 aaPredicted RBP14.61□□□□□ -0.07
MSH2-206ENST00000543555 GRM5P41594 1212 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 OTUD4Q01804 1114 aaKnown RBP14.61□□□□□ -0.07
MSH2-206ENST00000543555 MORF4L2Q15014 288 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 ACAP1Q15027 740 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 DUSP28Q4G0W2 176 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 BBS12Q6ZW61 710 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 UBA3Q8TBC4 463 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 ACTL9Q8TC94 416 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 KIF12Q96FN5 646 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 CCDC77Q9BR77 488 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 FRMD8P1Q9BZ68 369 aaPredicted RBP14.61□□□□□ -0.07
MSH2-206ENST00000543555 SAYSD1Q9NPB0 183 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 DOCK3Q8IZD9 2030 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 CDH16O75309 829 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 CREB1P16220 341 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 PECAM1P16284 738 aaPredicted RBP14.61□□□□□ -0.07
MSH2-206ENST00000543555 PSMC4P43686 418 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 CRHR2Q13324 411 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 DEFB115Q30KQ5 88 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 RNF187Q5TA31 235 aaPredicted RBP14.61□□□□□ -0.07
MSH2-206ENST00000543555 RNASEH2BQ5TBB1 312 aaKnown RBP14.61□□□□□ -0.07
MSH2-206ENST00000543555 VSTM1Q6UX27 236 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 DPH6Q7L8W6 267 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 GPR142Q7Z601 462 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 IFNL1Q8IU54 200 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 MICALL1Q8N3F8 863 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 TTC39CQ8N584 583 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 TTC13Q8NBP0 860 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 OR6J1Q8NGC5 347 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 MAML3Q96JK9 1138 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 CABS1Q96KC9 395 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 SAE1Q9UBE0 346 aaPredicted RBP14.61□□□□□ -0.07
MSH2-206ENST00000543555 PCSK1NQ9UHG2 260 aa14.61□□□□□ -0.07
MSH2-206ENST00000543555 TMEM120BA0PK00 339 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 NDC80O14777 642 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 RNF8O76064 485 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 IFNB1P01574 187 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 CD48P09326 243 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 CYP3A5P20815 502 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 MIPP30301 263 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 MYO1EQ12965 1108 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 GRB14Q14449 540 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 FAM102AQ5T9C2 384 aaPredicted RBP14.6□□□□□ -0.07
MSH2-206ENST00000543555 ANKRD23Q86SG2 305 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 CFAP57Q96MR6 1250 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 LCLAT1Q6UWP7 414 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 CYP4X1Q8N118 509 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 CMASQ8NFW8 434 aaPredicted RBP14.6□□□□□ -0.07
MSH2-206ENST00000543555 CAPNS2Q96L46 248 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 TTC25Q96NG3 672 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 NT5C1AQ9BXI3 368 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 TSPAN16Q9UKR8 245 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 KIAA1257Q9ULG3 409 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 SHOC2Q9UQ13 582 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 NAALADL1Q9UQQ1 740 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 TRPM7Q96QT4 1865 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 IFNAR2P48551 515 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 ACVR2BQ13705 512 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 DGKDQ16760 1214 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 CCDC142Q17RM4 750 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 KIZQ2M2Z5 673 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 DCAF4L1Q3SXM0 396 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 LRRC34Q8IZ02 419 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 ARHGAP39Q9C0H5 1083 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 ASNSD1Q9NWL6 643 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 EURLQ9NYK6 297 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 USP18Q9UMW8 372 aa14.6□□□□□ -0.07
MSH2-206ENST00000543555 FOXO6A8MYZ6 492 aa14.59□□□□□ -0.07
MSH2-206ENST00000543555 TRUB2O95900 331 aaKnown RBP14.59□□□□□ -0.07
MSH2-206ENST00000543555 ZNF143P52747 638 aaPredicted RBP14.59□□□□□ -0.07
MSH2-206ENST00000543555 KCTD6Q8NC69 237 aa14.59□□□□□ -0.07
MSH2-206ENST00000543555 TINF2Q9BSI4 451 aa14.59□□□□□ -0.07
MSH2-206ENST00000543555 ABHD16BQ9H3Z7 469 aa14.59□□□□□ -0.07
MSH2-206ENST00000543555 SETD4Q9NVD3 440 aa14.59□□□□□ -0.07
MSH2-206ENST00000543555 TBK1Q9UHD2 729 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms