RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 RPL22P35268 128 aaKnown RBP24.82■■□□□ 1.56
SHD-201ENST00000543264 RTP1P59025 263 aa24.82■■□□□ 1.56
SHD-201ENST00000543264 NET1Q7Z628 596 aaPredicted RBP24.82■■□□□ 1.56
SHD-201ENST00000543264 PDIK1LQ8N165 341 aa24.82■■□□□ 1.56
SHD-201ENST00000543264 APOBEC3GQ9HC16 384 aaKnown RBP24.82■■□□□ 1.56
SHD-201ENST00000543264 NDE1Q9NXR1 346 aa24.82■■□□□ 1.56
SHD-201ENST00000543264 AGTPBP1Q9UPW5 1226 aa24.82■■□□□ 1.56
SHD-201ENST00000543264 AP2B1P63010 937 aa24.81■■□□□ 1.56
SHD-201ENST00000543264 MTMR1Q13613 665 aa24.81■■□□□ 1.56
SHD-201ENST00000543264 IGDCC3Q8IVU1 814 aa24.81■■□□□ 1.56
SHD-201ENST00000543264 SLC25A41Q8N5S1 370 aa24.81■■□□□ 1.56
SHD-201ENST00000543264 DRAXINQ8NBI3 349 aaPredicted RBP24.81■■□□□ 1.56
SHD-201ENST00000543264 RSAD2Q8WXG1 361 aa24.81■■□□□ 1.56
SHD-201ENST00000543264 XPO7Q9UIA9 1087 aaKnown RBP24.81■■□□□ 1.56
SHD-201ENST00000543264 TMEM63AO94886 807 aa24.81■■□□□ 1.56
SHD-201ENST00000543264 ZACNQ401N2 412 aa24.81■■□□□ 1.56
SHD-201ENST00000543264 SESTD1Q86VW0 696 aa24.81■■□□□ 1.56
SHD-201ENST00000543264 MECRQ9BV79 373 aa24.81■■□□□ 1.56
SHD-201ENST00000543264 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.81■■□□□ 1.56
SHD-201ENST00000543264 TMX2Q9Y320 296 aa24.81■■□□□ 1.56
SHD-201ENST00000543264 KAT6AQ92794 2004 aa24.81■■□□□ 1.56
SHD-201ENST00000543264 LTBP1Q14766 1721 aa24.8■■□□□ 1.56
SHD-201ENST00000543264 INHBAP08476 426 aa24.8■■□□□ 1.56
SHD-201ENST00000543264 KITP10721 976 aa24.8■■□□□ 1.56
SHD-201ENST00000543264 KBTBD12Q3ZCT8 623 aa24.8■■□□□ 1.56
SHD-201ENST00000543264 SYCP2LQ5T4T6 812 aa24.8■■□□□ 1.56
SHD-201ENST00000543264 C1orf146Q5VVC0 180 aa24.8■■□□□ 1.56
SHD-201ENST00000543264 ULK2Q8IYT8 1036 aa24.8■■□□□ 1.56
SHD-201ENST00000543264 SPATA16Q9BXB7 569 aa24.8■■□□□ 1.56
SHD-201ENST00000543264 IQCGQ9H095 443 aaKnown RBP24.8■■□□□ 1.56
SHD-201ENST00000543264 CAPN14A8MX76 684 aa24.8■■□□□ 1.56
SHD-201ENST00000543264 C4BPAP04003 597 aaKnown RBP24.8■■□□□ 1.56
SHD-201ENST00000543264 ACOT2P49753 483 aa24.8■■□□□ 1.56
SHD-201ENST00000543264 MRPS9P82933 396 aaKnown RBP24.8■■□□□ 1.56
SHD-201ENST00000543264 LRRC38Q5VT99 294 aa24.8■■□□□ 1.56
SHD-201ENST00000543264 MYLK4Q86YV6 388 aaPredicted RBP24.8■■□□□ 1.56
SHD-201ENST00000543264 ARHGAP18Q8N392 663 aa24.8■■□□□ 1.56
SHD-201ENST00000543264 AZIN2Q96A70 460 aa24.8■■□□□ 1.56
SHD-201ENST00000543264 PPM1HQ9ULR3 514 aa24.8■■□□□ 1.56
SHD-201ENST00000543264 TM7SF2O76062 418 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 VNN1O95497 513 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 MMP8P22894 467 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 BASP1P80723 227 aaKnown RBP24.79■■□□□ 1.56
SHD-201ENST00000543264 SMTNL2Q2TAL5 461 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 TRMT5Q32P41 509 aaKnown RBP24.79■■□□□ 1.56
SHD-201ENST00000543264 HSF5Q4G112 596 aaPredicted RBP24.79■■□□□ 1.56
SHD-201ENST00000543264 DNAJC24Q6P3W2 148 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 ZNF395Q9H8N7 513 aaPredicted RBP24.79■■□□□ 1.56
SHD-201ENST00000543264 CNTN3Q9P232 1028 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 SLC7A8Q9UHI5 535 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 E7ESA3 106 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 SPECC1L-ADORA2AF8WAN1 911 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 NFIBO00712 420 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 ELK3P41970 407 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 ACTR3P61158 418 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 ZNF200P98182 395 aaPredicted RBP24.79■■□□□ 1.56
SHD-201ENST00000543264 SLC18A2Q05940 514 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 CFAP157Q5JU67 520 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 CDHR3Q6ZTQ4 885 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 ANO5Q75V66 913 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 ARID3BQ8IVW6 561 aaPredicted RBP24.79■■□□□ 1.56
SHD-201ENST00000543264 ZNF606Q8WXB4 792 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 ZWILCHQ9H900 591 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 MARCOQ9UEW3 520 aaPredicted RBP24.79■■□□□ 1.56
SHD-201ENST00000543264 PTPRJQ12913 1337 aa24.79■■□□□ 1.56
SHD-201ENST00000543264 COPEO14579 308 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 CST8O60676 142 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 CDC16Q13042 620 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 FAM182AQ5T1J6 154 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 PRPF39Q86UA1 669 aaKnown RBP24.78■■□□□ 1.56
SHD-201ENST00000543264 UNC45BQ8IWX7 931 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 UBE2OQ9C0C9 1292 aaKnown RBP24.78■■□□□ 1.56
SHD-201ENST00000543264 CCPG1Q9ULG6 757 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 PLA2G4CQ9UP65 541 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 DCAF8L1A6NGE4 600 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 I3L4J1 428 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 GARTP22102 1010 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 BRD2P25440 801 aaKnown RBP24.78■■□□□ 1.56
SHD-201ENST00000543264 NRLP54845 237 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 LIN52Q52LA3 116 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 KCNT1Q5JUK3 1230 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 FAM91A1Q658Y4 838 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 SH2D5Q6ZV89 423 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 MTBPQ96DY7 904 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 ACAP3Q96P50 834 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 SRPK1Q96SB4 655 aaKnown RBP24.78■■□□□ 1.56
SHD-201ENST00000543264 DDX56Q9NY93 547 aaKnown RBP24.78■■□□□ 1.56
SHD-201ENST00000543264 KCNK4Q9NYG8 393 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 POLIQ9UNA4 740 aa24.78■■□□□ 1.56
SHD-201ENST00000543264 TCRBV9S1A1TA0A576 114 aa24.77■■□□□ 1.56
SHD-201ENST00000543264 RNASEH1O60930 286 aaKnown RBP24.77■■□□□ 1.56
SHD-201ENST00000543264 FAM155BO75949 473 aa24.77■■□□□ 1.56
SHD-201ENST00000543264 ETS2P15036 469 aa24.77■■□□□ 1.56
SHD-201ENST00000543264 CRABP2P29373 138 aa24.77■■□□□ 1.56
SHD-201ENST00000543264 HSD17B4P51659 736 aa24.77■■□□□ 1.56
SHD-201ENST00000543264 ALDH18A1P54886 795 aaKnown RBP24.77■■□□□ 1.56
SHD-201ENST00000543264 YWHAGP61981 247 aaKnown RBP eCLIP24.77■■□□□ 1.56
SHD-201ENST00000543264 TMPRSS15P98073 1019 aa24.77■■□□□ 1.56
SHD-201ENST00000543264 LRRC36Q1X8D7 754 aa24.77■■□□□ 1.56
SHD-201ENST00000543264 ARMC3Q5W041 872 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms