RNA–Protein interactions for RNA: ENST00000543246.5

STK38L-208, Transcript of serine/threonine kinase 38 like, human

TSL 4

Gene STK38L, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STK38L-208	ENST00000543246	TMEM191B	P0C7N4	346 aa		4.91	□□□□□ -1.62
STK38L-208	ENST00000543246	ATXN1L	P0C7T5	689 aa	Known RBP	4.91	□□□□□ -1.62
STK38L-208	ENST00000543246	LILRA4	P59901	499 aa		4.91	□□□□□ -1.62
STK38L-208	ENST00000543246	LONRF3	Q496Y0	759 aa		4.91	□□□□□ -1.62
STK38L-208	ENST00000543246	LCE1E	Q5T753	118 aa		4.91	□□□□□ -1.62
STK38L-208	ENST00000543246	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.91	□□□□□ -1.62
STK38L-208	ENST00000543246	CUL5	Q93034	780 aa		4.91	□□□□□ -1.62
STK38L-208	ENST00000543246	VCPIP1	Q96JH7	1222 aa		4.91	□□□□□ -1.62
STK38L-208	ENST00000543246	SNX18	Q96RF0	628 aa		4.91	□□□□□ -1.62
STK38L-208	ENST00000543246	PTDSS2	Q9BVG9	487 aa		4.91	□□□□□ -1.62
STK38L-208	ENST00000543246	MRPL46	Q9H2W6	279 aa	Known RBP	4.91	□□□□□ -1.62
STK38L-208	ENST00000543246	MCM8	Q9UJA3	840 aa		4.91	□□□□□ -1.62
STK38L-208	ENST00000543246	LY6G6E	A0A0G2JKS1	128 aa		4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	DSCR3	O14972	297 aa		4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	TJP3	O95049	919 aa		4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	AHSG	P02765	367 aa		4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	PRF1	P14222	555 aa		4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	RENBP	P51606	427 aa		4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	NOG	Q13253	232 aa		4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	TRIM71	Q2Q1W2	868 aa	Known RBP	4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	TBC1D25	Q3MII6	688 aa		4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	L1TD1	Q5T7N2	865 aa	Known RBP	4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	HEATR3	Q7Z4Q2	680 aa		4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	NECAB2	Q7Z6G3	386 aa		4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	THAP7	Q9BT49	309 aa	Predicted RBP	4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	EFHD1	Q9BUP0	239 aa		4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	CIPC	Q9C0C6	399 aa		4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	NISCH	Q9Y2I1	1504 aa		4.9	□□□□□ -1.63
STK38L-208	ENST00000543246	ADK	P55263	362 aa	Known RBP	4.89	□□□□□ -1.63
STK38L-208	ENST00000543246	HTRA4	P83105	476 aa	Predicted RBP	4.89	□□□□□ -1.63
STK38L-208	ENST00000543246	IQCB1	Q15051	598 aa		4.89	□□□□□ -1.63
STK38L-208	ENST00000543246	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
STK38L-208	ENST00000543246	SYDE2	Q5VT97	1194 aa		4.89	□□□□□ -1.63
STK38L-208	ENST00000543246	SDE2	Q6IQ49	451 aa		4.89	□□□□□ -1.63
STK38L-208	ENST00000543246	ZNF813	Q6ZN06	617 aa		4.89	□□□□□ -1.63
STK38L-208	ENST00000543246	PPP1R3B	Q86XI6	285 aa		4.89	□□□□□ -1.63
STK38L-208	ENST00000543246	PCSK9	Q8NBP7	692 aa	Known RBP	4.89	□□□□□ -1.63
STK38L-208	ENST00000543246	ACRBP	Q8NEB7	543 aa		4.89	□□□□□ -1.63
STK38L-208	ENST00000543246	LENG8	Q96PV6	779 aa	Predicted RBP	4.89	□□□□□ -1.63
STK38L-208	ENST00000543246	PUS7	Q96PZ0	661 aa	Known RBP	4.89	□□□□□ -1.63
STK38L-208	ENST00000543246	FOXP1	Q9H334	677 aa	Predicted RBP	4.89	□□□□□ -1.63
STK38L-208	ENST00000543246	FZD9	O00144	591 aa		4.88	□□□□□ -1.63
STK38L-208	ENST00000543246	ERC2	O15083	957 aa		4.88	□□□□□ -1.63
STK38L-208	ENST00000543246	OAZ2	O95190	189 aa		4.88	□□□□□ -1.63
STK38L-208	ENST00000543246	ALPL	P05186	524 aa		4.88	□□□□□ -1.63
STK38L-208	ENST00000543246	FPR3	P25089	353 aa		4.88	□□□□□ -1.63
STK38L-208	ENST00000543246	THBS3	P49746	956 aa		4.88	□□□□□ -1.63
STK38L-208	ENST00000543246	ALDH5A1	P51649	535 aa	Predicted RBP	4.88	□□□□□ -1.63
STK38L-208	ENST00000543246	EXOSC9	Q06265	439 aa	Known RBP	4.88	□□□□□ -1.63
STK38L-208	ENST00000543246	TWIST1	Q15672	202 aa		4.88	□□□□□ -1.63
STK38L-208	ENST00000543246	C10orf25	Q5T742	122 aa		4.88	□□□□□ -1.63
STK38L-208	ENST00000543246	EFCAB2	Q5VUJ9	269 aa		4.88	□□□□□ -1.63
STK38L-208	ENST00000543246	TRHDE	Q9UKU6	1024 aa		4.88	□□□□□ -1.63
STK38L-208	ENST00000543246	NDRG4	Q9ULP0	352 aa	Known RBP	4.88	□□□□□ -1.63
STK38L-208	ENST00000543246	TMA7	Q9Y2S6	64 aa	Known RBP	4.88	□□□□□ -1.63
STK38L-208	ENST00000543246	DLD	P09622	509 aa	Known RBP	4.87	□□□□□ -1.63
STK38L-208	ENST00000543246	HOXD9	P28356	352 aa	Predicted RBP	4.87	□□□□□ -1.63
STK38L-208	ENST00000543246	KCNJ5	P48544	419 aa		4.87	□□□□□ -1.63
STK38L-208	ENST00000543246	HTR6	P50406	440 aa		4.87	□□□□□ -1.63
STK38L-208	ENST00000543246	HK3	P52790	923 aa		4.87	□□□□□ -1.63
STK38L-208	ENST00000543246	KRT85	P78386	507 aa		4.87	□□□□□ -1.63
STK38L-208	ENST00000543246	GHRHR	Q02643	423 aa		4.87	□□□□□ -1.63
STK38L-208	ENST00000543246	E2F2	Q14209	437 aa		4.87	□□□□□ -1.63
STK38L-208	ENST00000543246	THEMIS2	Q5TEJ8	643 aa		4.87	□□□□□ -1.63
STK38L-208	ENST00000543246	MEX3C	Q5U5Q3	659 aa	Known RBP	4.87	□□□□□ -1.63
STK38L-208	ENST00000543246	PNMA8A	Q86V59	439 aa	Predicted RBP	4.87	□□□□□ -1.63
STK38L-208	ENST00000543246	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
STK38L-208	ENST00000543246	SOCS4	Q8WXH5	440 aa		4.87	□□□□□ -1.63
STK38L-208	ENST00000543246	GABRQ	Q9UN88	632 aa		4.87	□□□□□ -1.63
STK38L-208	ENST00000543246	TCRBV5S1A1T	A0A578	114 aa		4.86	□□□□□ -1.63
STK38L-208	ENST00000543246	SHTN1	A0MZ66	631 aa		4.86	□□□□□ -1.63
STK38L-208	ENST00000543246	CD8B2	A6NJW9	211 aa		4.86	□□□□□ -1.63
STK38L-208	ENST00000543246	TMEM232	C9JQI7	657 aa		4.86	□□□□□ -1.63
STK38L-208	ENST00000543246	SLC16A6	O15403	523 aa		4.86	□□□□□ -1.63
STK38L-208	ENST00000543246	ABLIM3	O94929	683 aa		4.86	□□□□□ -1.63
STK38L-208	ENST00000543246	FTL	P02792	175 aa	Predicted RBP	4.86	□□□□□ -1.63
STK38L-208	ENST00000543246	NANOS2	P60321	138 aa	Known RBP	4.86	□□□□□ -1.63
STK38L-208	ENST00000543246	FAM187B	Q17R55	369 aa		4.86	□□□□□ -1.63
STK38L-208	ENST00000543246	DEPDC1	Q5TB30	811 aa		4.86	□□□□□ -1.63
STK38L-208	ENST00000543246	MTHFD1L	Q6UB35	978 aa		4.86	□□□□□ -1.63
STK38L-208	ENST00000543246	DPCD	Q9BVM2	203 aa	Predicted RBP	4.86	□□□□□ -1.63
STK38L-208	ENST00000543246	LMBRD1	Q9NUN5	540 aa		4.86	□□□□□ -1.63
STK38L-208	ENST00000543246	TFCP2L1	Q9NZI6	479 aa		4.86	□□□□□ -1.63
STK38L-208	ENST00000543246	PCDHA1	Q9Y5I3	950 aa		4.86	□□□□□ -1.63
STK38L-208	ENST00000543246	hCG_1984214	I3L0E3	225 aa		4.85	□□□□□ -1.63
STK38L-208	ENST00000543246	UNC5C	O95185	931 aa		4.85	□□□□□ -1.63
STK38L-208	ENST00000543246	E2F1	Q01094	437 aa		4.85	□□□□□ -1.63
STK38L-208	ENST00000543246	CYP1B1	Q16678	543 aa		4.85	□□□□□ -1.63
STK38L-208	ENST00000543246	RNASE12	Q5GAN4	147 aa	Known RBP	4.85	□□□□□ -1.63
STK38L-208	ENST00000543246	DPY19L3	Q6ZPD9	716 aa		4.85	□□□□□ -1.63
STK38L-208	ENST00000543246	C9orf47	Q6ZRZ4	202 aa		4.85	□□□□□ -1.63
STK38L-208	ENST00000543246	SLC15A3	Q8IY34	581 aa		4.85	□□□□□ -1.63
STK38L-208	ENST00000543246	MIER2	Q8N344	545 aa		4.85	□□□□□ -1.63
STK38L-208	ENST00000543246	FYTTD1	Q96QD9	318 aa	Known RBP	4.85	□□□□□ -1.63
STK38L-208	ENST00000543246	MMS19	Q96T76	1030 aa		4.85	□□□□□ -1.63
STK38L-208	ENST00000543246	MRPS17	Q9Y2R5	130 aa	Known RBP	4.85	□□□□□ -1.63
STK38L-208	ENST00000543246	NOTCH4	Q99466	2003 aa		4.84	□□□□□ -1.63
STK38L-208	ENST00000543246		H3BNX3	289 aa		4.84	□□□□□ -1.63
STK38L-208	ENST00000543246	DTNB	O60941	627 aa		4.84	□□□□□ -1.63
STK38L-208	ENST00000543246	GCAT	O75600	419 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms