RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 GPR158Q5T848 1215 aa17.3■□□□□ 0.36
CIT-212ENST00000543239 TMEM150AQ86TG1 271 aa17.3■□□□□ 0.36
CIT-212ENST00000543239 TTC39CQ8N584 583 aa17.3■□□□□ 0.36
CIT-212ENST00000543239 DEPDC1BQ8WUY9 529 aa17.3■□□□□ 0.36
CIT-212ENST00000543239 B3GNT5Q9BYG0 378 aa17.3■□□□□ 0.36
CIT-212ENST00000543239 ZNF518BQ9C0D4 1074 aa17.3■□□□□ 0.36
CIT-212ENST00000543239 DNAI2Q9GZS0 605 aa17.3■□□□□ 0.36
CIT-212ENST00000543239 TASP1Q9H6P5 420 aa17.3■□□□□ 0.36
CIT-212ENST00000543239 EHD2Q9NZN4 543 aa17.3■□□□□ 0.36
CIT-212ENST00000543239 MAGED2Q9UNF1 606 aaPredicted RBP17.3■□□□□ 0.36
CIT-212ENST00000543239 LRRN2O75325 713 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 COL9A1P20849 921 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 FMO5P49326 533 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 GPC5P78333 572 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 CYP4F8P98187 520 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 PFKPQ01813 784 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 STXBP5Q5T5C0 1151 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 DENND5BQ6ZUT9 1274 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 ACOT1Q86TX2 421 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 FAM35AQ86V20 835 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 SIX5Q8N196 739 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 STKLD1Q8NE28 680 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 MRPS31Q92665 395 aaKnown RBP17.29■□□□□ 0.36
CIT-212ENST00000543239 SRRTQ9BXP5 876 aaKnown RBP17.29■□□□□ 0.36
CIT-212ENST00000543239 PLA2G2FQ9BZM2 168 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 MFSD1Q9H3U5 465 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.29■□□□□ 0.36
CIT-212ENST00000543239 HMGXB4Q9UGU5 601 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 HCN4Q9Y3Q4 1203 aa17.29■□□□□ 0.36
CIT-212ENST00000543239 F8VP50 259 aa17.28■□□□□ 0.36
CIT-212ENST00000543239 P4HA2O15460 535 aa17.28■□□□□ 0.36
CIT-212ENST00000543239 CILPO75339 1184 aa17.28■□□□□ 0.36
CIT-212ENST00000543239 PDGFBP01127 241 aaPredicted RBP17.28■□□□□ 0.36
CIT-212ENST00000543239 PSMC3P17980 439 aa17.28■□□□□ 0.36
CIT-212ENST00000543239 VITQ6UXI7 678 aa17.28■□□□□ 0.36
CIT-212ENST00000543239 ARID3BQ8IVW6 561 aaPredicted RBP17.28■□□□□ 0.36
CIT-212ENST00000543239 TRIM59Q8IWR1 403 aa17.28■□□□□ 0.36
CIT-212ENST00000543239 SMARCD1Q96GM5 515 aa17.28■□□□□ 0.36
CIT-212ENST00000543239 TTLL2Q9BWV7 592 aa17.28■□□□□ 0.36
CIT-212ENST00000543239 NT5C1AQ9BXI3 368 aa17.28■□□□□ 0.36
CIT-212ENST00000543239 ARHGEF3Q9NR81 526 aa17.28■□□□□ 0.36
CIT-212ENST00000543239 OBP2AQ9NY56 170 aa17.28■□□□□ 0.36
CIT-212ENST00000543239 NUP210Q8TEM1 1887 aaPredicted RBP17.28■□□□□ 0.36
CIT-212ENST00000543239 CLDN5O00501 218 aa17.27■□□□□ 0.36
CIT-212ENST00000543239 TADA3O75528 432 aa17.27■□□□□ 0.36
CIT-212ENST00000543239 CCDC192P0DO97 292 aa17.27■□□□□ 0.36
CIT-212ENST00000543239 VIPR2P41587 438 aa17.27■□□□□ 0.36
CIT-212ENST00000543239 CETN1Q12798 172 aa17.27■□□□□ 0.36
CIT-212ENST00000543239 PAQR9Q6ZVX9 377 aa17.27■□□□□ 0.36
CIT-212ENST00000543239 MFSD6LQ8IWD5 586 aa17.27■□□□□ 0.36
CIT-212ENST00000543239 CMTM8Q8IZV2 173 aa17.27■□□□□ 0.36
CIT-212ENST00000543239 FUKQ8N0W3 1084 aa17.27■□□□□ 0.36
CIT-212ENST00000543239 DNASE1L2Q92874 299 aa17.27■□□□□ 0.36
CIT-212ENST00000543239 MED10Q9BTT4 135 aa17.27■□□□□ 0.36
CIT-212ENST00000543239 TRMT61BQ9BVS5 477 aaKnown RBP17.27■□□□□ 0.36
CIT-212ENST00000543239 SLC46A2Q9BY10 475 aa17.27■□□□□ 0.36
CIT-212ENST00000543239 KCNH6Q9H252 994 aa17.27■□□□□ 0.36
CIT-212ENST00000543239 DMAP1Q9NPF5 467 aaPredicted RBP17.27■□□□□ 0.36
CIT-212ENST00000543239 TMEM30AQ9NV96 361 aa17.27■□□□□ 0.36
CIT-212ENST00000543239 DACH1Q9UI36 760 aa17.27■□□□□ 0.36
CIT-212ENST00000543239 KRBA1A5PL33 1030 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 HEPACAM2A8MVW5 462 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 DPYSL4O14531 572 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 CD58P19256 250 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 PPP3CCP48454 512 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 CLCN5P51795 746 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 CACNA2D1P54289 1103 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 ORC1Q13415 861 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 MON1AQ86VX9 555 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 GPT2Q8TD30 523 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 SLC2A14Q8TDB8 520 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 WHAMMQ8TF30 809 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 IRF7Q92985 503 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 SHDQ96IW2 340 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 TWNKQ96RR1 684 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 BRD9Q9H8M2 597 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 TRPV5Q9NQA5 729 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 KRT82Q9NSB4 513 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 CISHQ9NSE2 258 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 CA14Q9ULX7 337 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 ARIH1Q9Y4X5 557 aaPredicted RBP17.26■□□□□ 0.35
CIT-212ENST00000543239 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.26■□□□□ 0.35
CIT-212ENST00000543239 OBSL1O75147 1896 aa17.26■□□□□ 0.35
CIT-212ENST00000543239 GREB1Q4ZG55 1949 aa17.25■□□□□ 0.35
CIT-212ENST00000543239 DENND4CQ5VZ89 1909 aa17.25■□□□□ 0.35
CIT-212ENST00000543239 NCANO14594 1321 aa17.25■□□□□ 0.35
CIT-212ENST00000543239 RTN3O95197 1032 aaPredicted RBP17.25■□□□□ 0.35
CIT-212ENST00000543239 CCDC130P13994 396 aa17.25■□□□□ 0.35
CIT-212ENST00000543239 NPR3P17342 541 aa17.25■□□□□ 0.35
CIT-212ENST00000543239 TBXAS1P24557 533 aaPredicted RBP17.25■□□□□ 0.35
CIT-212ENST00000543239 AVPR1AP37288 418 aa17.25■□□□□ 0.35
CIT-212ENST00000543239 USP46P62068 366 aa17.25■□□□□ 0.35
CIT-212ENST00000543239 YWHAEP62258 255 aaKnown RBP17.25■□□□□ 0.35
CIT-212ENST00000543239 PRKCQQ04759 706 aa17.25■□□□□ 0.35
CIT-212ENST00000543239 FCHO2Q0JRZ9 810 aa17.25■□□□□ 0.35
CIT-212ENST00000543239 CUL2Q13617 745 aa17.25■□□□□ 0.35
CIT-212ENST00000543239 GRM2Q14416 872 aa17.25■□□□□ 0.35
CIT-212ENST00000543239 DPCR1Q3MIW9 517 aa17.25■□□□□ 0.35
CIT-212ENST00000543239 CWF19L1Q69YN2 538 aaKnown RBP17.25■□□□□ 0.35
CIT-212ENST00000543239 TXNDC8Q6A555 127 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms