RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 TGM2P21980 687 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 USP6NLQ92738 828 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 APBB2Q92870 758 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 USP1O94782 785 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 AKT1P31749 480 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 LRRC74AQ0VAA2 488 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 VPS50Q96JG6 964 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.61□□□□□ -0.23
TNC-212ENST00000542877 SOX13Q9UN79 622 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 RPS6KL1Q9Y6S9 549 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 ADGRA2Q96PE1 1338 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 MYO3AQ8NEV4 1616 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 TM9SF1O15321 606 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 OCM2P0CE71 109 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 OCMP0CE72 109 aaPredicted RBP13.61□□□□□ -0.23
TNC-212ENST00000542877 PTPN4P29074 926 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 PSMD7P51665 324 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 FBXW4P57775 412 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 CCNG2Q16589 344 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 PRR5LQ6MZQ0 368 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 DCP1BQ8IZD4 617 aaKnown RBP13.61□□□□□ -0.23
TNC-212ENST00000542877 RXFP1Q9HBX9 757 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 ARHGAP20Q9P2F6 1191 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 SFMBT1Q9UHJ3 866 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 TAGLN3Q9UI15 199 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 RAB21Q9UL25 225 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 KIAA1257Q9ULG3 409 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
TNC-212ENST00000542877 KANSL1LA0AUZ9 987 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 SDR42E2A6NKP2 422 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 MED24O75448 989 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 RHOBTB1O94844 696 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 EFCAB12Q6NXP0 572 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 EXD1Q8NHP7 514 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 ECSITQ9BQ95 431 aa13.61□□□□□ -0.23
TNC-212ENST00000542877 FKBP6O75344 327 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 GEMP55040 296 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 POU4F1Q01851 419 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 PDIA6Q15084 440 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 DENND1BQ6P3S1 775 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 GPR141Q7Z602 305 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 SNX31Q8N9S9 440 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 CHST13Q8NET6 341 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 PHF21AQ96BD5 680 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 PLEKHA8Q96JA3 519 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 PAFAH2Q99487 392 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 EXOSC4Q9NPD3 245 aaKnown RBP13.6□□□□□ -0.23
TNC-212ENST00000542877 GIT2Q14161 759 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 ERAP1Q9NZ08 941 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 ARIH2O95376 493 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 C11orf63Q6NUN7 778 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 BNC2Q6ZN30 1099 aaPredicted RBP13.6□□□□□ -0.23
TNC-212ENST00000542877 SLC26A11Q86WA9 606 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 DDHD1Q8NEL9 900 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 JADE3Q92613 823 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 ACSF2Q96CM8 615 aaPredicted RBP13.6□□□□□ -0.23
TNC-212ENST00000542877 NEXMIFQ5QGS0 1516 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 A0A1B0GW55 424 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 CFAP99D6REC4 459 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 SLCO1B7G3V0H7 640 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 DUX4L2P0CJ85 424 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 DUX4L3P0CJ86 424 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 DUX4L4P0CJ87 422 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 DUX4L5P0CJ88 424 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 DUX4L6P0CJ89 424 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 DUX4L7P0CJ90 424 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 RALBP11234 206 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 ITGA4P13612 1032 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 GARTP22102 1010 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 PTPN7P35236 360 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 AARS2Q5JTZ9 985 aaKnown RBP13.6□□□□□ -0.23
TNC-212ENST00000542877 ZNF571Q7Z3V5 609 aaPredicted RBP13.6□□□□□ -0.23
TNC-212ENST00000542877 ZNF786Q8N393 782 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 TTC30BQ8N4P2 665 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 TMC2Q8TDI7 906 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 DUX4Q9UBX2 424 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 ITM2BQ9Y287 266 aa13.6□□□□□ -0.23
TNC-212ENST00000542877 F8VZ95 297 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 TADA2AO75478 443 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 PROSCO94903 275 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 SLC25A27O95847 323 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 FAM200BP0CF97 657 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 NCAM1P13591 858 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 PSMC3P17980 439 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 GRK2P25098 689 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 PTENP60484 403 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 EZH2Q15910 746 aaKnown RBP13.59□□□□□ -0.23
TNC-212ENST00000542877 UNC45BQ8IWX7 931 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 SELENONQ9NZV5 590 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 H2AFY2Q9P0M6 372 aaPredicted RBP13.59□□□□□ -0.23
TNC-212ENST00000542877 CES2O00748 559 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 STRNO43815 780 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 ITGB3P05106 788 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 GLI1P08151 1106 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 MYBPC2Q14324 1141 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 UGT3A1Q6NUS8 523 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 CCDC60Q8IWA6 550 aaPredicted RBP13.59□□□□□ -0.23
TNC-212ENST00000542877 ZFYVE19Q96K21 471 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 SHCBP1LQ9BZQ2 653 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 COPG1Q9Y678 874 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms