RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 OR6B2Q6IFH4 312 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 CTU1Q7Z7A3 348 aaKnown RBP11.62□□□□□ -0.55
SCG3-202ENST00000542355 ZNF280BQ86YH2 543 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 ANKRD52Q8NB46 1076 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 JOSD2Q8TAC2 188 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 SEPT8Q92599 483 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 PPP1R12CQ9BZL4 782 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 METTL5Q9NRN9 209 aaKnown RBP11.62□□□□□ -0.55
SCG3-202ENST00000542355 TMEM59LQ9UK28 342 aa11.62□□□□□ -0.55
SCG3-202ENST00000542355 TTC7AQ9ULT0 858 aaPredicted RBP11.62□□□□□ -0.55
SCG3-202ENST00000542355 DDHD2O94830 711 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 H2AFXP16104 143 aaPredicted RBP11.61□□□□□ -0.55
SCG3-202ENST00000542355 PTPN1P18031 435 aaKnown RBP11.61□□□□□ -0.55
SCG3-202ENST00000542355 LHX1P48742 406 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 AARSP49588 968 aaKnown RBP eCLIP11.61□□□□□ -0.55
SCG3-202ENST00000542355 TAS2R40P59535 323 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 ZNF252P-AS1Q0IIN9 211 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 LLGL1Q15334 1064 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 NOMO2Q5JPE7 1267 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 KIAA0319Q5VV43 1072 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 CCDC70Q6NSX1 233 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 FBXO46Q6PJ61 603 aaPredicted RBP11.61□□□□□ -0.55
SCG3-202ENST00000542355 CD300LGQ6UXG3 332 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 KLHL7Q8IXQ5 586 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 TMEM86AQ8N2M4 240 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 EMC1Q8N766 993 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 DIS3LQ8TF46 1054 aaKnown RBP11.61□□□□□ -0.55
SCG3-202ENST00000542355 HDAC7Q8WUI4 952 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 UROC1Q96N76 676 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 KRT12Q99456 494 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 TMEM161AQ9NX61 479 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.61□□□□□ -0.55
SCG3-202ENST00000542355 PCDHB7Q9Y5E2 793 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 F8W810 466 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 CLDN5O00501 218 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 INPPL1O15357 1258 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 ITGB1P05556 798 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 TKTP29401 623 aaKnown RBP11.61□□□□□ -0.55
SCG3-202ENST00000542355 MAN1A1P33908 653 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 GSCP56915 257 aaPredicted RBP11.61□□□□□ -0.55
SCG3-202ENST00000542355 SLC7A5Q01650 507 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 RNASELQ05823 741 aaKnown RBP11.61□□□□□ -0.55
SCG3-202ENST00000542355 FAM102AQ5T9C2 384 aaPredicted RBP11.61□□□□□ -0.55
SCG3-202ENST00000542355 SEL1L2Q5TEA6 688 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 CC2D1AQ6P1N0 951 aaPredicted RBP11.61□□□□□ -0.55
SCG3-202ENST00000542355 DCLRE1AQ6PJP8 1040 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 FAM183BPQ6ZVS7 135 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 SCUBE3Q8IX30 993 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 RHOT1Q8IXI2 618 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 URGCPQ8TCY9 931 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 MCRS1Q96EZ8 462 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 SLC4A5Q9BY07 1137 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 MIS12Q9H081 205 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 ARGLU1Q9NWB6 273 aaPredicted RBP11.61□□□□□ -0.55
SCG3-202ENST00000542355 NR2E1Q9Y466 385 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 FRMPD3Q5JV73 1810 aa11.61□□□□□ -0.55
SCG3-202ENST00000542355 B4GALT3O60512 393 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 SETSIPP0DME0 302 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 ODC1P11926 461 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 PSMA2P25787 234 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 CYP2C18P33260 490 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 GJC1P36383 396 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 CLCN6P51797 869 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 BCAT1P54687 386 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 VSNL1P62760 191 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 BST2Q10589 180 aaKnown RBP11.6□□□□□ -0.55
SCG3-202ENST00000542355 PIGHQ14442 188 aaPredicted RBP11.6□□□□□ -0.55
SCG3-202ENST00000542355 TCTN1Q2MV58 587 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 MDH1BQ5I0G3 518 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 C8orf74Q6P047 294 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 DEFB128Q7Z7B8 93 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 TMEM110Q86TL2 294 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 ABI1Q8IZP0 508 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 FUKQ8N0W3 1084 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 PIWIL1Q96J94 861 aaKnown RBP11.6□□□□□ -0.55
SCG3-202ENST00000542355 TOX2Q96NM4 488 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 NAP1L3Q99457 506 aaPredicted RBP11.6□□□□□ -0.55
SCG3-202ENST00000542355 HNRNPABQ99729 332 aaKnown RBP11.6□□□□□ -0.55
SCG3-202ENST00000542355 PLEKHA4Q9H4M7 779 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 TBC1D13Q9NVG8 400 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 KANSL3Q9P2N6 904 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 RAB21Q9UL25 225 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 MYBPHLA2RUH7 354 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 GRAP2O75791 330 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 GABBR2O75899 941 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 TCF4P15884 667 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 OR1G1P47890 313 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 TAF5Q15542 800 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 ATP13A4Q4VNC1 1196 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 METTL23Q86XA0 190 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 STK32AQ8WU08 396 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 RSPH1Q8WYR4 309 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 APBB2Q92870 758 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 FAM193BQ96PV7 902 aaPredicted RBP11.6□□□□□ -0.55
SCG3-202ENST00000542355 SYT15Q9BQS2 421 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 MED10Q9BTT4 135 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 B3GNT5Q9BYG0 378 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 DDX47Q9H0S4 455 aaKnown RBP11.6□□□□□ -0.55
SCG3-202ENST00000542355 ELAC1Q9H777 363 aaKnown RBP11.6□□□□□ -0.55
SCG3-202ENST00000542355 CRTAC1Q9NQ79 661 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms