RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 DAAM2Q86T65 1068 aa4.48□□□□□ -1.69
LEMD3-204ENST00000542032 GAS2L3Q86XJ1 694 aa4.48□□□□□ -1.69
LEMD3-204ENST00000542032 EXOC8Q8IYI6 725 aa4.48□□□□□ -1.69
LEMD3-204ENST00000542032 P2RX7Q99572 595 aaKnown RBP4.48□□□□□ -1.69
LEMD3-204ENST00000542032 BRIP1Q9BX63 1249 aa4.48□□□□□ -1.69
LEMD3-204ENST00000542032 KRTAP4-4Q9BYR3 166 aa4.48□□□□□ -1.69
LEMD3-204ENST00000542032 ZMAT3Q9HA38 289 aaKnown RBP4.48□□□□□ -1.69
LEMD3-204ENST00000542032 SMURF2Q9HAU4 748 aa4.48□□□□□ -1.69
LEMD3-204ENST00000542032 DUSP22Q9NRW4 184 aa4.48□□□□□ -1.69
LEMD3-204ENST00000542032 FLRT1Q9NZU1 646 aa4.48□□□□□ -1.69
LEMD3-204ENST00000542032 STAP2Q9UGK3 403 aa4.48□□□□□ -1.69
LEMD3-204ENST00000542032 CPA4Q9UI42 421 aa4.48□□□□□ -1.69
LEMD3-204ENST00000542032 SERTAD3Q9UJW9 196 aa4.48□□□□□ -1.69
LEMD3-204ENST00000542032 PADI4Q9UM07 663 aa4.48□□□□□ -1.69
LEMD3-204ENST00000542032 HNRNPCP07910 306 aaKnown RBP eCLIP4.47□□□□□ -1.69
LEMD3-204ENST00000542032 CELA2AP08217 269 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 ALDH9A1P49189 494 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 SSBP2P81877 361 aaPredicted RBP4.47□□□□□ -1.69
LEMD3-204ENST00000542032 MYO1EQ12965 1108 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 E2F2Q14209 437 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 NFE2Q16621 373 aaPredicted RBP4.47□□□□□ -1.69
LEMD3-204ENST00000542032 PROSER3Q2NL68 480 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 HSP90AB2PQ58FF8 381 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 TREML2Q5T2D2 321 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 ARHGAP40Q5TG30 622 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 SWSAP1Q6NVH7 229 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 C1QL2Q7Z5L3 287 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 COL23A1Q86Y22 540 aaPredicted RBP4.47□□□□□ -1.69
LEMD3-204ENST00000542032 KIAA0319LQ8IZA0 1049 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 ZBTB34Q8NCN2 500 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 JDP2Q8WYK2 163 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 MAML1Q92585 1016 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 PMM1Q92871 262 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 FSD1LQ9BXM9 530 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 TMEM60Q9H2L4 133 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 PRDM16Q9HAZ2 1276 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 CNNM1Q9NRU3 951 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 GABRQQ9UN88 632 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 SHOC2Q9UQ13 582 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 TMX2Q9Y320 296 aa4.47□□□□□ -1.69
LEMD3-204ENST00000542032 DNAJC9-AS1A6NH13 148 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 MYO1FO00160 1098 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 PHGDHO43175 533 aaKnown RBP4.46□□□□□ -1.7
LEMD3-204ENST00000542032 PRPF3O43395 683 aaKnown RBP4.46□□□□□ -1.7
LEMD3-204ENST00000542032 JTBO76095 146 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 CDK4P11802 303 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 NDUFB7P17568 137 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 EN2P19622 333 aaPredicted RBP4.46□□□□□ -1.7
LEMD3-204ENST00000542032 CLCN2P51788 898 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 DGKEP52429 567 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 FAM102BQ5T8I3 360 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 KIAA1614Q5VZ46 1190 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 NXNQ6DKJ4 435 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 SUMO4Q6EEV6 95 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 RGS7BPQ6MZT1 257 aaPredicted RBP4.46□□□□□ -1.7
LEMD3-204ENST00000542032 NPNTQ6UXI9 565 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 MAEAQ7L5Y9 396 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 ZNF280BQ86YH2 543 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 DNAJC5GQ8N7S2 189 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 IL31RAQ8NI17 732 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 RP9Q8TA86 221 aaKnown RBP4.46□□□□□ -1.7
LEMD3-204ENST00000542032 SOCS4Q8WXH5 440 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 GLG1Q92896 1179 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 LRGUKQ96M69 825 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 THAP7Q9BT49 309 aaPredicted RBP4.46□□□□□ -1.7
LEMD3-204ENST00000542032 C1QTNF7Q9BXJ2 289 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 B3GNT5Q9BYG0 378 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 MYH16Q9H6N6 1097 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 CXorf36Q9H7Y0 433 aa4.46□□□□□ -1.7
LEMD3-204ENST00000542032 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.46□□□□□ -1.7
LEMD3-204ENST00000542032 A1L4Q6 167 aa4.45□□□□□ -1.7
LEMD3-204ENST00000542032 PROB1E7EW31 1015 aa4.45□□□□□ -1.7
LEMD3-204ENST00000542032 hCG_1984214I3L0E3 225 aa4.45□□□□□ -1.7
LEMD3-204ENST00000542032 BTN3A1O00481 513 aa4.45□□□□□ -1.7
LEMD3-204ENST00000542032 NHLRC4P0CG21 123 aaPredicted RBP4.45□□□□□ -1.7
LEMD3-204ENST00000542032 U2AF1L5P0DN76 240 aaPredicted RBP4.45□□□□□ -1.7
LEMD3-204ENST00000542032 XRCC6P12956 609 aaKnown RBP eCLIP4.45□□□□□ -1.7
LEMD3-204ENST00000542032 KCNA3P22001 575 aa4.45□□□□□ -1.7
LEMD3-204ENST00000542032 EEFSECP57772 596 aaKnown RBP4.45□□□□□ -1.7
LEMD3-204ENST00000542032 U2AF1Q01081 240 aaKnown RBP eCLIP4.45□□□□□ -1.7
LEMD3-204ENST00000542032 SRSF4Q08170 494 aaKnown RBP4.45□□□□□ -1.7
LEMD3-204ENST00000542032 SLC10A2Q12908 348 aaPredicted RBP4.45□□□□□ -1.7
LEMD3-204ENST00000542032 CTBP1Q13363 440 aa4.45□□□□□ -1.7
LEMD3-204ENST00000542032 LLGL1Q15334 1064 aa4.45□□□□□ -1.7
LEMD3-204ENST00000542032 ODR4Q5SWX8 454 aa4.45□□□□□ -1.7
LEMD3-204ENST00000542032 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
LEMD3-204ENST00000542032 LMBRD2Q68DH5 695 aaPredicted RBP4.45□□□□□ -1.7
LEMD3-204ENST00000542032 ZNF783Q6ZMS7 281 aa4.45□□□□□ -1.7
LEMD3-204ENST00000542032 ZNF782Q6ZMW2 699 aaPredicted RBP4.45□□□□□ -1.7
LEMD3-204ENST00000542032 PARS2Q7L3T8 475 aaKnown RBP4.45□□□□□ -1.7
LEMD3-204ENST00000542032 ZNF804AQ7Z570 1209 aa4.45□□□□□ -1.7
LEMD3-204ENST00000542032 TCEAL8Q8IYN2 117 aa4.45□□□□□ -1.7
LEMD3-204ENST00000542032 C22orf23Q9BZE7 217 aa4.45□□□□□ -1.7
LEMD3-204ENST00000542032 GLOD4Q9HC38 313 aa4.45□□□□□ -1.7
LEMD3-204ENST00000542032 RGS17Q9UGC6 210 aaPredicted RBP4.45□□□□□ -1.7
LEMD3-204ENST00000542032 MRPS17Q9Y2R5 130 aaKnown RBP4.45□□□□□ -1.7
LEMD3-204ENST00000542032 A0A1W2PPL8 197 aa4.44□□□□□ -1.7
LEMD3-204ENST00000542032 TISP43B9A030 160 aa4.44□□□□□ -1.7
LEMD3-204ENST00000542032 FRS3O43559 492 aa4.44□□□□□ -1.7
LEMD3-204ENST00000542032 CTNND1O60716 968 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms