RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 SLC20A1Q8WUM9 679 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 RPRD1AQ96P16 312 aaPredicted RBP11.14□□□□□ -0.63
GABRB3-204ENST00000541819 MANSC1Q9H8J5 431 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 GALNT8Q9NY28 637 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 USP6P35125 1406 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 CCL15-CCL14A0A0B4J2E2 113 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 MGAT4DA6NG13 374 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 PDZK1P1A8MUH7 402 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 HLA-DRAP01903 254 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 TMED10P49755 219 aaKnown RBP11.14□□□□□ -0.63
GABRB3-204ENST00000541819 OXCT1P55809 520 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 STX5Q13190 355 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 CYLC2Q14093 348 aaPredicted RBP11.14□□□□□ -0.63
GABRB3-204ENST00000541819 CCL15Q16663 113 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 FAM45BPQ6NSW5 357 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 SPATA4Q8NEY3 305 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 CCDC126Q96EE4 140 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 GLT1D1Q96MS3 346 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 GJB4Q9NTQ9 266 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.14□□□□□ -0.63
GABRB3-204ENST00000541819 TSC22D4Q9Y3Q8 395 aa11.14□□□□□ -0.63
GABRB3-204ENST00000541819 GSTM1P09488 218 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 CLTBP09497 229 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 ARMCX4Q5H9R4 360 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 OLFML2BQ68BL8 750 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 GPAT2Q6NUI2 795 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 MOV10L1Q9BXT6 1211 aaKnown RBP11.13□□□□□ -0.63
GABRB3-204ENST00000541819 NIF3L1Q9GZT8 377 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 DCDC2Q9UHG0 476 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 AAR2Q9Y312 384 aaKnown RBP11.13□□□□□ -0.63
GABRB3-204ENST00000541819 GPR182O15218 404 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 ITGALP20701 1170 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 COX10Q12887 443 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 SLC18A3Q16572 532 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 GALNTL6Q49A17 601 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 FMR1NBQ8N0W7 255 aaPredicted RBP11.13□□□□□ -0.63
GABRB3-204ENST00000541819 CAMKK1Q8N5S9 505 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 CHST13Q8NET6 341 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 BHMTQ93088 406 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 HPDLQ96IR7 371 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 L3MBTL3Q96JM7 780 aaPredicted RBP11.13□□□□□ -0.63
GABRB3-204ENST00000541819 FRMD8Q9BZ67 464 aaPredicted RBP11.13□□□□□ -0.63
GABRB3-204ENST00000541819 TMEM8AQ9HCN3 771 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 DBR1Q9UK59 544 aaKnown RBP11.13□□□□□ -0.63
GABRB3-204ENST00000541819 SYNMO15061 1565 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 CDC42BPGQ6DT37 1551 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 B2RBV5 119 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 TBX3O15119 743 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 AVPR1AP37288 418 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 TALDO1P37837 337 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 MAGEA4P43358 317 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 KLC1Q07866 573 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 ITGA9Q13797 1035 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 TERF2Q15554 542 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 TMEM154Q6P9G4 183 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 HOMEZQ8IX15 550 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 FAM45AQ8TCE6 357 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 CARD9Q9H257 536 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 SENP2Q9HC62 589 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 PAIP2BQ9ULR5 123 aaKnown RBP11.13□□□□□ -0.63
GABRB3-204ENST00000541819 CPSF4O95639 269 aaKnown RBP11.13□□□□□ -0.63
GABRB3-204ENST00000541819 CNPP09543 421 aaKnown RBP11.13□□□□□ -0.63
GABRB3-204ENST00000541819 HLA-DQA1Q5Y7H0 255 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 SYTL1Q8IYJ3 562 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 REEP2Q9BRK0 252 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 UBQLN1Q9UMX0 589 aaKnown RBP11.13□□□□□ -0.63
GABRB3-204ENST00000541819 DCDC2CA8MYV0 355 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 IFRD1O00458 451 aaPredicted RBP11.13□□□□□ -0.63
GABRB3-204ENST00000541819 EPHB2P29323 1055 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 GTF2H1P32780 548 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 GALCP54803 685 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 PSMC6P62333 389 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 AGBL2Q5U5Z8 902 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 KCTD17Q8N5Z5 321 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 ZNF473Q8WTR7 871 aaKnown RBP11.13□□□□□ -0.63
GABRB3-204ENST00000541819 OSBPL5Q9H0X9 879 aaPredicted RBP11.13□□□□□ -0.63
GABRB3-204ENST00000541819 KCTD10Q9H3F6 313 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 DPP7Q9UHL4 492 aa11.13□□□□□ -0.63
GABRB3-204ENST00000541819 NCF1BA6NI72 391 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-204ENST00000541819 NCF1CA8MVU1 366 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-204ENST00000541819 URODP06132 367 aa11.12□□□□□ -0.63
GABRB3-204ENST00000541819 NCF1P14598 390 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-204ENST00000541819 THPOP40225 353 aa11.12□□□□□ -0.63
GABRB3-204ENST00000541819 GNASQ5JWF2 1037 aa11.12□□□□□ -0.63
GABRB3-204ENST00000541819 FBXO32Q969P5 355 aa11.12□□□□□ -0.63
GABRB3-204ENST00000541819 C9orf72Q96LT7 481 aa11.12□□□□□ -0.63
GABRB3-204ENST00000541819 OXCT2Q9BYC2 517 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-204ENST00000541819 OSBPL8Q9BZF1 889 aa11.12□□□□□ -0.63
GABRB3-204ENST00000541819 ROPN1BQ9BZX4 212 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-204ENST00000541819 SPRTNQ9H040 489 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-204ENST00000541819 ROPN1Q9HAT0 212 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-204ENST00000541819 AVENQ9NQS1 362 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-204ENST00000541819 SNX12Q9UMY4 172 aa11.12□□□□□ -0.63
GABRB3-204ENST00000541819 UGGT1Q9NYU2 1555 aa11.12□□□□□ -0.63
GABRB3-204ENST00000541819 IGSF9BQ9UPX0 1349 aa11.12□□□□□ -0.63
GABRB3-204ENST00000541819 FAM25AB3EWG3 89 aa11.12□□□□□ -0.63
GABRB3-204ENST00000541819 FAM25CB3EWG5 89 aa11.12□□□□□ -0.63
GABRB3-204ENST00000541819 FAM25GB3EWG6 89 aa11.12□□□□□ -0.63
GABRB3-204ENST00000541819 ZBTB39O15060 712 aa11.12□□□□□ -0.63
GABRB3-204ENST00000541819 TEX33O43247 280 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms