RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 AGO4Q9HCK5 861 aaKnown RBP4.96□□□□□ -1.62
SNHG1-217ENST00000541578 TBCCD1Q9NVR7 557 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 AFF4Q9UHB7 1163 aaKnown RBP4.96□□□□□ -1.62
SNHG1-217ENST00000541578 PCDHA1Q9Y5I3 950 aa4.96□□□□□ -1.62
SNHG1-217ENST00000541578 ADCY10Q96PN6 1610 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 MYADML2A6NDP7 307 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 FFAR2O15552 330 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 TLR5O60602 858 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 HAUS5O94927 633 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 ESRRBO95718 433 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 NUDT3O95989 172 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 HSD3B1P14060 373 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 MALP21145 153 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 FDXRP22570 491 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 NANOS3P60323 173 aaKnown RBP4.95□□□□□ -1.62
SNHG1-217ENST00000541578 NKX6-1P78426 367 aaPredicted RBP4.95□□□□□ -1.62
SNHG1-217ENST00000541578 FMO1Q01740 532 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 SCAPQ12770 1279 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 PMS2P11Q13670 270 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 FLYWCH1Q4VC44 716 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 HIBCHQ6NVY1 386 aaPredicted RBP4.95□□□□□ -1.62
SNHG1-217ENST00000541578 FBXO38Q6PIJ6 1188 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 LDHAL6AQ6ZMR3 332 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 ZNF783Q6ZMS7 281 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 BEND5Q7L4P6 421 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 GPR149Q86SP6 731 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 COL23A1Q86Y22 540 aaPredicted RBP4.95□□□□□ -1.62
SNHG1-217ENST00000541578 DCBLD1Q8N8Z6 715 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 IL17RDQ8NFM7 739 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 IPCEF1Q8WWN9 437 aaPredicted RBP4.95□□□□□ -1.62
SNHG1-217ENST00000541578 ANKS1AQ92625 1134 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 MUL1Q969V5 352 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 FUBP1Q96AE4 644 aaKnown RBP4.95□□□□□ -1.62
SNHG1-217ENST00000541578 NACC2Q96BF6 587 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 IQCDQ96DY2 449 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 CRAMP1Q96RY5 1269 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 ATP6V0A4Q9HBG4 840 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 AS3MTQ9HBK9 375 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 SLAMF7Q9NQ25 335 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 ZNHIT2Q9UHR6 403 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 MAST3O60307 1309 aa4.95□□□□□ -1.62
SNHG1-217ENST00000541578 KIAA0586Q9BVV6 1533 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 THAP12O43422 761 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 FGF18O76093 207 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 CSTBP04080 98 aaKnown RBP4.94□□□□□ -1.62
SNHG1-217ENST00000541578 SLC6A4P31645 630 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 ADRA1BP35368 520 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 IL6STP40189 918 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-217ENST00000541578 MPLP40238 635 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 SLFN5Q08AF3 891 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 FOXI1Q12951 378 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 MPP3Q13368 585 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 TAF12Q16514 161 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 CYP2A13Q16696 494 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 ERCC6LQ2NKX8 1250 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 UTP14CQ5TAP6 766 aaKnown RBP4.94□□□□□ -1.62
SNHG1-217ENST00000541578 TLDC1Q6P9B6 456 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 RFX8Q6ZV50 586 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 COLGALT2Q8IYK4 626 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 CCDC150Q8NCX0 1101 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 MRGPRX4Q96LA9 322 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 Q96MF0 132 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 ISCA1Q9BUE6 129 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 PACSIN1Q9BY11 444 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 RIOX1Q9H6W3 641 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 C9orf78Q9NZ63 289 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-217ENST00000541578 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-217ENST00000541578 LRFN1Q9P244 771 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 HSFX1Q9UBD0 423 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 CPNE7Q9UBL6 633 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 PAXBP1Q9Y5B6 917 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 USP19O94966 1318 aa4.94□□□□□ -1.62
SNHG1-217ENST00000541578 TNIKQ9UKE5 1360 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 MYO1CO00159 1063 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 SLC43A1O75387 559 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 AGFG2O95081 481 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 GNAI2P04899 355 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 CD1AP06126 327 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 SBK3P0C264 359 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 HARSP12081 509 aaKnown RBP4.93□□□□□ -1.62
SNHG1-217ENST00000541578 TSHRP16473 764 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 PIK3CGP48736 1102 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 SOX8P57073 446 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 TLE1Q04724 770 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 PPFIA1Q13136 1202 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 SNAPC2Q13487 334 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 RAB32Q13637 225 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 PRKG1Q13976 671 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 HABP2Q14520 560 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-217ENST00000541578 MAPRE1Q15691 268 aaKnown RBP4.93□□□□□ -1.62
SNHG1-217ENST00000541578 STRIP1Q5VSL9 837 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 KLHDC7AQ5VTJ3 777 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 JAKMIP3Q5VZ66 844 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-217ENST00000541578 SLC44A3Q8N4M1 653 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 AOPEPQ8N6M6 819 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 ATP11CQ8NB49 1132 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 PCSK9Q8NBP7 692 aaKnown RBP4.93□□□□□ -1.62
SNHG1-217ENST00000541578 SLC9A6Q92581 669 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 GCC1Q96CN9 775 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms