RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 WEE2P0C1S8 567 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 FOXN2P32314 431 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 SCARA5Q6ZMJ2 495 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 HEMGNQ9BXL5 484 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 CISHQ9NSE2 258 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 POLIQ9UNA4 740 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 GINS2Q9Y248 185 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 MBLAC1A4D2B0 266 aaPredicted RBP18.06■□□□□ 0.48
SPIDR-227ENST00000541342 MYO1EQ12965 1108 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 SYDE1Q6ZW31 735 aaPredicted RBP18.06■□□□□ 0.48
SPIDR-227ENST00000541342 RXFP1Q9HBX9 757 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 DONSONQ9NYP3 566 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 ANAPC5Q9UJX4 755 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 RALAP11233 206 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 ATF2P15336 505 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 NOMO3P69849 1222 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 ADAM17P78536 824 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 MON1BQ7L1V2 547 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 KIRREL3Q8IZU9 778 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 SOCS4Q8WXH5 440 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 MIEF2Q96C03 454 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 HAS3O00219 553 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 ANP32DO95626 131 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 HOXA11P31270 313 aaPredicted RBP18.06■□□□□ 0.48
SPIDR-227ENST00000541342 ADCY8P40145 1251 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 ZNF394Q53GI3 561 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 SRRM1Q8IYB3 904 aaKnown RBP18.06■□□□□ 0.48
SPIDR-227ENST00000541342 NSMCE1Q8WV22 266 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 ZNF606Q8WXB4 792 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 SUFUQ9UMX1 484 aa18.06■□□□□ 0.48
SPIDR-227ENST00000541342 KRT19P08727 400 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 TAC1P20366 129 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 ATP5DP30049 168 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 PSEN2P49810 448 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 ZNF200P98182 395 aaPredicted RBP18.05■□□□□ 0.48
SPIDR-227ENST00000541342 C9orf72Q96LT7 481 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 PLVAPQ9BX97 442 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 MYL3P08590 195 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 GCAP28676 217 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 ECHDC2Q86YB7 292 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 GBP7Q8N8V2 638 aaPredicted RBP18.05■□□□□ 0.48
SPIDR-227ENST00000541342 TRPV1Q8NER1 839 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 ATL2Q8NHH9 583 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 ARHGAP39Q9C0H5 1083 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 CXCL16Q9H2A7 254 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 AVENQ9NQS1 362 aaPredicted RBP18.05■□□□□ 0.48
SPIDR-227ENST00000541342 C15orf41Q9Y2V0 281 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 ITGB3P05106 788 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 CYP2C9P11712 490 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 NSFP46459 744 aaKnown RBP18.05■□□□□ 0.48
SPIDR-227ENST00000541342 RAP1GAPP47736 663 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 CPT1AP50416 773 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 WDR4P57081 412 aaKnown RBP18.05■□□□□ 0.48
SPIDR-227ENST00000541342 KLHL29Q96CT2 875 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 MAGEB18Q96M61 343 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 OSMRQ99650 979 aa18.05■□□□□ 0.48
SPIDR-227ENST00000541342 NXF1Q9UBU9 619 aaKnown RBP18.05■□□□□ 0.48
SPIDR-227ENST00000541342 SMIM35A0A1B0GVV1 85 aa18.04■□□□□ 0.48
SPIDR-227ENST00000541342 HGSO14964 777 aaPredicted RBP18.04■□□□□ 0.48
SPIDR-227ENST00000541342 GAS8O95995 478 aa18.04■□□□□ 0.48
SPIDR-227ENST00000541342 CCNB1P14635 433 aa18.04■□□□□ 0.48
SPIDR-227ENST00000541342 TAS2R40P59535 323 aa18.04■□□□□ 0.48
SPIDR-227ENST00000541342 SREBF2Q12772 1141 aa18.04■□□□□ 0.48
SPIDR-227ENST00000541342 MTFR1Q15390 333 aa18.04■□□□□ 0.48
SPIDR-227ENST00000541342 ASB7Q9H672 318 aa18.04■□□□□ 0.48
SPIDR-227ENST00000541342 TREHO43280 583 aa18.04■□□□□ 0.48
SPIDR-227ENST00000541342 KLRC2P26717 231 aa18.04■□□□□ 0.48
SPIDR-227ENST00000541342 MAN1A1P33908 653 aa18.04■□□□□ 0.48
SPIDR-227ENST00000541342 PTP4A2Q12974 167 aa18.04■□□□□ 0.48
SPIDR-227ENST00000541342 RELL1Q8IUW5 271 aa18.04■□□□□ 0.48
SPIDR-227ENST00000541342 MAML1Q92585 1016 aa18.04■□□□□ 0.48
SPIDR-227ENST00000541342 CDH16O75309 829 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 BRD2P25440 801 aaKnown RBP18.03■□□□□ 0.48
SPIDR-227ENST00000541342 TM4SF4P48230 202 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 CAV1Q03135 178 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 TRIM72Q6ZMU5 477 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 GLIS1Q8NBF1 620 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 GRK7Q8WTQ7 553 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 DNAJB3Q8WWF6 145 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 THOC1Q96FV9 657 aaKnown RBP18.03■□□□□ 0.48
SPIDR-227ENST00000541342 SDCBP2Q9H190 292 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 ABT1Q9ULW3 272 aaKnown RBP18.03■□□□□ 0.48
SPIDR-227ENST00000541342 MYADML2A6NDP7 307 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 STX2P32856 288 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 TFAP2BQ92481 460 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 UTP4Q969X6 686 aaKnown RBP18.03■□□□□ 0.48
SPIDR-227ENST00000541342 ACAP3Q96P50 834 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 C11orf70Q9BRQ4 267 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 BCO2Q9BYV7 579 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 AP5M1Q9H0R1 490 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 Q9Y3F1 56 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 RALGAPA2Q2PPJ7 1873 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 CEP350Q5VT06 3117 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 CDH8P55286 799 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 WDR72Q3MJ13 1102 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 RNF43Q68DV7 783 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 TMEM40Q8WWA1 233 aa18.03■□□□□ 0.48
SPIDR-227ENST00000541342 GCOM2Q9BZD3 368 aaPredicted RBP18.03■□□□□ 0.48
SPIDR-227ENST00000541342 NPTXRO95502 500 aa18.02■□□□□ 0.48
SPIDR-227ENST00000541342 MYBL1P10243 752 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms