RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 SPTLC3Q9NUV7 552 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 GDAP2Q9NXN4 497 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 BARX2Q9UMQ3 279 aaPredicted RBP7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 FAN1Q9Y2M0 1017 aa7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 PRG3Q9Y2Y8 225 aaPredicted RBP7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 RANBP2P49792 3224 aaKnown RBP7.07□□□□□ -1.28
CLTCL1-206ENST00000540896 A0A087X0T9 212 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 EIF3CLB5ME19 914 aaKnown RBP7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 I3L4J1 428 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 MED7O43513 233 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 DGKIO75912 1065 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 CALCAP01258 141 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 PAEPP09466 180 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 PDGFRBP09619 1106 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 FAM228BP0C875 321 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 ODC1P11926 461 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 ATP2A2P16615 1042 aaKnown RBP7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 GNA15P30679 374 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 ALDH7A1P49419 539 aaKnown RBP7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 RAD23BP54727 409 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 CENPCQ03188 943 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 USP4Q13107 963 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 ORC1Q13415 861 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 BTG3Q14201 252 aaPredicted RBP7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 BMS1Q14692 1282 aaKnown RBP7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 SLC18A3Q16572 532 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 SOWAHAQ2M3V2 549 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 ARHGAP29Q52LW3 1261 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 TIGD5Q53EQ6 642 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 SGO2Q562F6 1265 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 WSCD1Q658N2 575 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 ALKBH5Q6P6C2 394 aaKnown RBP7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 UNC93AQ86WB7 457 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 ZNF677Q86XU0 584 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 GLYCTKQ8IVS8 523 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 COLGALT2Q8IYK4 626 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 ADGRF2Q8IZF7 708 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 THEM5Q8N1Q8 247 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 TMEM86AQ8N2M4 240 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 PGBD3Q8N328 593 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 C17orf53Q8N3J3 647 aaPredicted RBP7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 TOP6BLQ8N6T0 577 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 ACRBPQ8NEB7 543 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 PHOSPHO2Q8TCD6 241 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 SLC20A1Q8WUM9 679 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 TMEM176AQ96HP8 235 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 TNIP3Q96KP6 325 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 YME1L1Q96TA2 773 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 EIF3CQ99613 913 aaKnown RBP7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 MRPL45Q9BRJ2 306 aaKnown RBP7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 SDCBP2Q9H190 292 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 FAM124BQ9H5Z6 455 aaPredicted RBP7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 NRDE2Q9H7Z3 1164 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 DNAJB4Q9UDY4 337 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 DSEQ9UL01 958 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 KIAA1257Q9ULG3 409 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 PPP2R2CQ9Y2T4 447 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 CEP83Q9Y592 693 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 PCDHA13Q9Y5I0 950 aa7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 TIMM13Q9Y5L4 95 aaPredicted RBP7.06□□□□□ -1.28
CLTCL1-206ENST00000540896 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 A0A1W2PPC1 479 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 FAM170AA1A519 330 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 GOLGA6L9A6NEM1 432 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 GRXCR1A8MXD5 290 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 NRP1O14786 923 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 CILPO75339 1184 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 TACC1O75410 805 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 KIF4AO95239 1232 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 GJB5O95377 273 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 MMEP08473 750 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 H2AFZP0C0S5 128 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 FAM163BP0C2L3 166 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 CHRNB2P17787 502 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 WARSP23381 471 aaKnown RBP7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 IGFBP6P24592 240 aaPredicted RBP7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 BRD2P25440 801 aaKnown RBP7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 LMO2P25791 158 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 BRCC3P46736 316 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 LHX1P48742 406 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 ZNF132P52740 706 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 NAP1L1P55209 391 aaKnown RBP7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 CDR2Q01850 454 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 DSC1Q08554 894 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 KIF5AQ12840 1032 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 C10orf76Q5T2E6 689 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 FAM109BQ6ICB4 259 aaPredicted RBP7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 H2AFVQ71UI9 128 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 ACOT1Q86TX2 421 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 CEP57Q86XR8 500 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 HERC6Q8IVU3 1022 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 CCAR2Q8N163 923 aaKnown RBP7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 PDCL2Q8N4E4 241 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 UBR7Q8N806 425 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 SLC4A11Q8NBS3 891 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 C3orf58Q8NDZ4 430 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 SLC9A7Q96T83 725 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 TMEM175Q9BSA9 504 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 ELOVL4Q9GZR5 314 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms