RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 CHD1LQ86WJ1 897 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 RALGPS2Q86X27 583 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-214ENST00000540865 MICU3Q86XE3 530 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 PROSER1Q86XN7 944 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 RAB11FIP4Q86YS3 637 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 SULF2Q8IWU5 870 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 SMC5Q8IY18 1101 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 YAF2Q8IY57 180 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 REXO1Q8N1G1 1221 aaKnown RBP5.09□□□□□ -1.59
SNHG1-214ENST00000540865 LEMD2Q8NC56 503 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 GRIN3AQ8TCU5 1115 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 TCP11Q8WWU5 503 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 WFDC12Q8WWY7 111 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 RABGGTAQ92696 567 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 TCEAL3Q969E4 200 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 MRRFQ96E11 262 aaKnown RBP5.09□□□□□ -1.59
SNHG1-214ENST00000540865 TCEAL4Q96EI5 215 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 CRELD1Q96HD1 420 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 NACC1Q96RE7 527 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 CORO1BQ9BR76 489 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 SH2D3AQ9BRG2 576 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 PAAF1Q9BRP4 392 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 TRIM6Q9C030 488 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-214ENST00000540865 GPR88Q9GZN0 384 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 NXF3Q9H4D5 531 aaKnown RBP5.09□□□□□ -1.59
SNHG1-214ENST00000540865 DHX33Q9H6R0 707 aaKnown RBP5.09□□□□□ -1.59
SNHG1-214ENST00000540865 AKTIPQ9H8T0 292 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 ZFYVE1Q9HBF4 777 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 C6orf50Q9HD87 102 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 TMEM9BQ9NQ34 198 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 C2orf42Q9NWW7 574 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 KIAA1522Q9P206 1035 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-214ENST00000540865 MTRRQ9UBK8 725 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 PPM1HQ9ULR3 514 aa5.09□□□□□ -1.59
SNHG1-214ENST00000540865 EVPLQ92817 2033 aa5.09□□□□□ -1.6
SNHG1-214ENST00000540865 CFAP46Q8IYW2 2715 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 LNP1A1A4G5 178 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 BCLAF3A2AJT9 711 aaKnown RBP5.08□□□□□ -1.6
SNHG1-214ENST00000540865 CASTOR2A6NHX0 329 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 EIF4E1BA6NMX2 242 aaKnown RBP5.08□□□□□ -1.6
SNHG1-214ENST00000540865 SLC38A8A6NNN8 435 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 HEPACAM2A8MVW5 462 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 SPECC1L-ADORA2AF8WAN1 911 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 TMEM189-UBE2V1I3L0A0 370 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 CDX4O14627 284 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-214ENST00000540865 HYAL3O43820 417 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-214ENST00000540865 EXTL3O43909 919 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 DKC1O60832 514 aaKnown RBP eCLIP5.08□□□□□ -1.62e-36■■□□□ 12.6
SNHG1-214ENST00000540865 ATG13O75143 517 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 PSMD10O75832 226 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 ABLIM3O94929 683 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 CYP11A1P05108 521 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 BMP6P22004 513 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 AKAP5P24588 427 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 GNA11P29992 359 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 HOXC13P31276 330 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 ELF1P32519 619 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 VIPR2P41587 438 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 CCR2P41597 374 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 SOX9P48436 509 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 USP11P51784 963 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 NPEPPSP55786 919 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 PTENP60484 403 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 PSMC5P62195 406 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 NRG1Q02297 640 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-214ENST00000540865 NUCB1Q02818 461 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 FCHO2Q0JRZ9 810 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 MXD4Q14582 209 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-214ENST00000540865 KARSQ15046 597 aaKnown RBP5.08□□□□□ -1.6
SNHG1-214ENST00000540865 PFKFB3Q16875 520 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-214ENST00000540865 TSNAXIP1Q2TAA8 658 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 PLA2G4FQ68DD2 849 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 SLC8B1Q6J4K2 584 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 SLC27A1Q6PCB7 646 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 APOA5Q6Q788 366 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 ANKS3Q6ZW76 656 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 FERMT3Q86UX7 667 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 TCEAL8Q8IYN2 117 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 CAMKK1Q8N5S9 505 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 RNF149Q8NC42 400 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 ZNF461Q8TAF7 563 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 ZSCAN18Q8TBC5 510 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-214ENST00000540865 BICD2Q8TD16 824 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 HASPINQ8TF76 798 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 CCDC12Q8WUD4 166 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-214ENST00000540865 TMEM143Q96AN5 459 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 WDR89Q96FK6 387 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-214ENST00000540865 CCDC136Q96JN2 1154 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 CEP170P1Q96L14 293 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 ZSWIM3Q96MP5 696 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 RUSC1Q9BVN2 902 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 BACH2Q9BYV9 841 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 CEP44Q9C0F1 390 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 ZMYND12Q9H0C1 365 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 DUSP15Q9H1R2 295 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-214ENST00000540865 SLC32A1Q9H598 525 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 CCDC86Q9H6F5 360 aaKnown RBP5.08□□□□□ -1.6
SNHG1-214ENST00000540865 CBX8Q9HC52 389 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 CACNA2D2Q9NY47 1150 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 SLC8A2Q9UPR5 921 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms